Transcription Factor
| Accessions: | 1ynw_B (3D-footprint 20231221) |
| Names: | Nuclear receptor subfamily 2 group B member 1, Retinoic acid receptor RXR-alpha, Retinoid X receptor alpha, RXRA_HUMAN |
| Organisms: | Homo sapiens |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Uniprot: | P19793 |
| Length: | 73 |
| Pfam Domains: | 1-69 Zinc finger, C4 type (two domains) |
| Sequence: (in bold interface residues) | 1 ICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQ 60 61 KCLAMGMKREAVQ |
| Interface Residues: | 10, 11, 13, 14, 20, 21, 23, 24, 27, 28, 52 |
| 3D-footprint Homologues: | 6fbq_A, 6l6q_B, 7wnh_D, 1a6y_A, 1lo1_A, 3g9m_B, 4oln_B, 2a66_A, 2nll_B, 1lat_A, 7xv6_B, 2ff0_A, 1dsz_A, 4umm_E, 3cbb_A, 8cef_H, 4iqr_B, 2han_A, 1hcq_E, 8hbm_B, 5krb_G, 2han_B, 1kb2_B, 4tnt_B, 5e69_A, 4hn5_B, 5emc_A, 7prw_B, 5cbx_B, 3g6t_A, 1r4i_A, 5cbz_E |
| Binding Motifs: | 1ynw_AB TGACCnnnnTGnCC 1ynw_B TGaCc |
| Binding Sites: | 1ynw_C 1ynw_D |
| Publications: | Shaffer P.L, Gewirth D.T. Structural analysis of RXR-VDR interactions on DR3 DNA. The Journal of steroid biochemistry and molecular biology 89-90:215-9 (2004). [Pubmed] |
| Related annotations: | PaperBLAST |
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