Transcription Factor
| Accessions: | ETS1_MOUSE (HOCOMOCO 10), P27577 (JASPAR 2024) |
| Names: | ETS1_MOUSE, p54, Protein C-ets-1 |
| Organisms: | Mus musculus |
| Libraries: | HOCOMOCO 10 1, JASPAR 2024 2 1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed] 2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 440 |
| Pfam Domains: | 54-135 Sterile alpha motif (SAM)/Pointed domain 335-416 Ets-domain |
| Sequence: (in bold interface residues) | 1 MKAAVDLKPTLTIIKTEKVDLELFPSPDMECADVPLLTPSSKEMMSQALKATFSGFTKEQ 60 61 QRLGIPKDPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMSGAALCALGKECFLELAPDF 120 121 VGDILWEHLEILQKEDVKPYQVNGANPTYPESCYTSDYFISYGIEHAQCVPPSEFSEPSF 180 181 ITESYQTLHPISSEELLSLKYENDYPSVILQDPLQTDTLQTDYFAIKQEVLTPDNMCLGR 240 241 ASRGKLGGQDSFESVESYDSCDRLTQSWSSQSSFNSLQRVPSYDSFDYEDYPAALPNHKP 300 301 KGTFKDYVRDRADLNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDG 360 361 WEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQS 420 421 LLGYTPEELHAMLDVKPDAD |
| Interface Residues: | 332, 387, 388, 390, 391, 392, 394, 395, 409 |
| 3D-footprint Homologues: | 3zp5_A, 1dux_F, 7jsa_J, 8ee9_F, 4mhg_A, 2stt_A, 4uno_A, 3jtg_A, 4l18_B, 4lg0_B, 1yo5_C, 4bqa_A, 1awc_A, 4iri_A, 1bc8_C |
| Binding Motifs: | MA0098.2 cccaCTTCCTGyyyb ETS1_MOUSE.H10MO.B|M01081 acmGGAWgt |
| Binding Sites: | MA0098.2.1 MA0098.2.10 MA0098.2.11 MA0098.2.12 MA0098.2.13 MA0098.2.14 MA0098.2.15 MA0098.2.16 MA0098.2.17 MA0098.2.18 MA0098.2.19 MA0098.2.2 MA0098.2.20 MA0098.2.3 MA0098.2.4 MA0098.2.5 MA0098.2.6 MA0098.2.7 MA0098.2.8 MA0098.2.9 |
| Publications: | Woods D. B., Ghysdael J., Owen M. J. Identification of nucleotide preferences in DNA sequences recognised specifially by c-Ets-1 protein. Nucleic Acids Res. 20:699-704 (1992). [Pubmed] |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.