Transcription Factor
| Accessions: | T100358_1.02 (CISBP 1.02) |
| Names: | AANF, T100358_1.02; |
| Organisms: | Acipenser baerii |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:Homeodomain |
| Length: | 174 |
| Pfam Domains: | 95-151 Homeobox domain 116-147 Homeobox KN domain |
| Sequence: (in bold interface residues) | 1 MASSAQFHKVLSDRKTTFTIESILGLDRTKECAPSAKPHRPWTGPDVSRQQDSPPVAPEL 60 61 VLLPQMKVQEDKNIVYNKRQYSESYKRALNWYIGRRPRTAFSGTQIEVLESVFRVNPYPG 120 121 IDVREELACKLELDEDRIQIWFQNRRAKLKRSHRESQFLLVKKVFTALQDPAEP |
| Interface Residues: | 51, 52, 83, 93, 95, 96, 97, 98, 136, 137, 139, 140, 143, 144, 147, 148, 151 |
| 3D-footprint Homologues: | 2er8_C, 1mnm_C, 3d1n_M, 5zfz_A, 2h1k_B, 1fjl_B, 6a8r_A, 3cmy_A, 1ig7_A, 1jgg_B, 6m3d_C, 1nk2_P, 3lnq_A, 2lkx_A, 1zq3_P, 2ld5_A, 6es3_K, 4xrs_G, 2hos_A, 1puf_A, 4cyc_A, 5flv_I, 3l1p_A, 1puf_B, 5zjt_E, 1au7_A, 3a01_E, 7psx_B, 5hod_A, 1b72_A, 2hdd_A, 7q3o_C, 5jlw_D, 3rkq_B, 2r5y_A, 2d5v_B, 7xrc_C, 2xsd_C, 1e3o_C, 1le8_A, 1le8_B, 1du0_A, 8g87_X, 1k61_B, 4qtr_D, 1o4x_A, 4j19_B |
| Binding Motifs: | M1166_1.02 tTAATTRg |
| Related annotations: | PaperBLAST |
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