Transcription Factor
| Accessions: | CodY (DBTBS 1.0) |
| Names: | CodY, CODY_BACSU, GTP-sensing transcriptional pleiotropic repressor CodY, VEG286B, Vegetative protein 286B |
| Organisms: | Bacillus subtilis |
| Libraries: | DBTBS 1.0 1 1 Sierro N, Makita Y, de Hoon M, Nakai K. DBTBS: a database of transcriptional regulation in Bacillus subtilis containing upstream intergenic conservation information. Nucleic acids research 36:D93-6 (2008). [Pubmed] |
| Uniprot: | P39779 |
| Length: | 259 |
| Pfam Domains: | 3-178 CodY GAF-like domain 189-233 HTH domain 198-257 CodY helix-turn-helix domain |
| Sequence: (in bold interface residues) | 1 MALLQKTRIINSMLQAAAGKPVNFKEMAETLRDVIDSNIFVVSRRGKLLGYSINQQIEND 60 61 RMKKMLEDRQFPEEYTKNLFNVPETSSNLDINSEYTAFPVENRDLFQAGLTTIVPIIGGG 120 121 ERLGTLILSRLQDQFNDDDLILAEYGATVVGMEILREKAEEIEEEARSKAVVQMAISSLS 180 181 YSELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT 240 241 YIKVLNNKFLIELENLKSH |
| Interface Residues: | 204, 213, 214, 215, 216, 218, 237 |
| 3D-footprint Homologues: | 8c7u_A, 8c7s_A |
| Binding Motifs: | CodY AAAAAksckGA |
| Binding Sites: | comK_2 dppA_2 hag_1 hutP_4 ilvB_2 srfAA_1 |
| Related annotations: | PaperBLAST |
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