Transcription Factor

						

			
Accessions: P25032 (JASPAR 2024)

			
Names: DNA-binding protein EMBP-1, EMBP1_WHEAT, HBP-1a(1, Histone promoter-binding protein 1a(1
Organisms: Triticum aestivum
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 354
Pfam Domains:   248-311 bZIP transcription factor
  250-301 Basic region leucine zipper
Sequence: 
(in bold interface residues)		   1 MASSSSATSGDDRPPAAGGGTPAQAHAEWAASMHAYYAAAASAAGHPYAAWPLPPQAQQH   60
  61 GLVAAGAGAAYGAGAVPHVPPPPAGTRHAHASMAAGVPYMAGESASAAGKGKRVGKTQRV  120
 121 PSGEINSSSGSGDAGSQGSSEKGDAGANQKGSSSSAKRRKSGAAKTEGEPSQAATVQNAV  180
 181 TEPPLEDKERSASKLLVLAPGRAALTSAAPNLNIGMDPLSASPSSLVQGEVNAAASSQSN  240
 241 ASLSQMDERELKRERRKQSNRESARRSRLRKQQECEELAQKVSELTAANGTLRSELDQLK  300
 301 KDCKTMETENKKLMGKILSHDDKMQQSEGPSVVTTLSIQVEAPEPHQGGHGKAS
Interface Residues: 253, 256, 257, 260, 261, 263, 264, 265, 267, 268
3D-footprint Homologues: 6mg1_B, 7x5e_E, 4eot_A, 2wt7_B, 1nwq_C, 1dh3_C, 5t01_B, 2dgc_A
Binding Motifs: MA0128.1 WsACGTGG
Binding Sites: MA0128.1.1
MA0128.1.10
MA0128.1.11
MA0128.1.12
MA0128.1.13
MA0128.1.2 / MA0128.1.6
MA0128.1.3
MA0128.1.4 / MA0128.1.5
MA0128.1.7
MA0128.1.8
MA0128.1.9
			
Publications: Niu X., Renshaw-Gegg L., Miller L., Guiltinan M. J. Bipartite determinants of DNA-binding specificity of plant basic leucine zipper proteins.. Plant Mol. Biol. 41:1-13 (1999). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.