Transcription Factor

						

			
Accessions: Q18056 (JASPAR 2024)

			
Names: Q18056_CAEEL
Organisms: Caenorhabditis elegans
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Uniprot: Q18056
Length: 268
Pfam Domains:    93-148 Helix-loop-helix DNA-binding domain
Sequence: 
(in bold interface residues)		   1 MPKVIPSSMSDYRSVPYNQTPKSGSERKRRNITNELINECKTIVQKSEEEHISQEVVLFR   60
  61 IVKLVTGVNLESNFSSNDLSESTRRKFDTESERRKVKTEREKIRRKKQDDCYAELKFFIL  120
 121 NKQMGSYEQRLKLERITILEIIIDYIKHNSDLLYPETIPQILPLLAGKSTATCENKENEK  180
 181 PKTRMEVKDLFPRLTFQEVQESPTSTSPLLTFPCIPMIPTTQFNVLSNYNTVPSIFSAPL  240
 241 RFILPSLQILTPETSDEEENEETVDISN
Interface Residues: 94, 98, 100, 101, 104, 105
3D-footprint Homologues: 2ypa_A
Binding Motifs: PL0004.1 rkrCgCGTGTCCcwd
UN0706.1 CGCrTGKC
			
Publications: Grove C.A, De Masi F, Barrasa M.I, Newburger D.E, Alkema M.J, Bulyk M.L, Walhout A.J. A multiparameter network reveals extensive divergence between C. elegans bHLH transcription factors. Cell 138:314-27 (2009). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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