Transcription Factor

Accessions: AtMYB104 (AthaMYB 1.0)
Names: AtMYB104, Myb-related protein 104, Transcription factor MYB104
Organisms: Arabidopsis thaliana
Libraries: AthaMYB 1.0 1
1 Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Uniprot: Q9SM27
Length: 376
Pfam Domains: 7-54 Myb-like DNA-binding domain
10-70 Myb-like DNA-binding domain
60-102 Myb-like DNA-binding domain
63-103 Myb-like DNA-binding domain
Sequence:
(in bold interface residues)
1 MKKTFTKSKWKPEEDRILKDYVIQYGDRTWTHVPKRTGLPHNPASCRFRWMNHLKPSLKK 60
61 GPFTDEEEKRVLQLHAVLGNKWSQMAREFPGRTDNEIKNFWNARRMRLKGKGLPVYPDEV 120
121 REQAIRTAAQYGVKVELLNAHYSQDSLMAGNVEKPQELNNLALNQCSPYYQSTLANVQPS 180
181 RNRVMEPETTFPFTGGSAMNEQNPTLLCNPYVESTQEQLPDSHLFGNVTYSSPPMPLIHE 240
241 VENLELPSFQGFDFHEEPSSFGAEQYNPMLNLEPHNTLVQSPLIGQTPTDFPSSFYDELL 300
301 DELLESVVNGSLGEIPKTDTSSESQLFQSSLRSHTDATPDIANTTGKPFLVSTHYITITS 360
361 FFVCSIQEVSTNLYA*
Interface Residues: 7, 42, 44, 45, 47, 48, 51, 52, 53, 94, 95, 98, 99, 102, 103, 104
3D-footprint Homologues: 3osg_A, 1vfc_A, 1w0t_A, 2kdz_A, 5eyb_B, 6kks_A, 1mse_C, 3zqc_A, 7xur_A
Binding Motifs: AtMYB104_I TACTGTTG
Binding Sites: TACTGTTG
Publications: Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Related annotations: PaperBLAST

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.