Transcription Factor

						

			
Accessions: AtMYB108 (AthaMYB 1.0)

			
Names: AtMYB108, BOS1, Myb-related protein 108, Protein BOTRYTIS-SUSCEPTIBLE 1, Transcription factor MYB108
Organisms: Arabidopsis thaliana
Libraries: AthaMYB 1.0 1
1 Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Uniprot: Q9LDE1
Length: 324
Pfam Domains:     21-68 Myb-like DNA-binding domain
    24-81 Myb-like DNA-binding domain
   74-117 Myb-like DNA-binding domain
   78-125 Myb-like DNA-binding domain
Sequence: 
(in bold interface residues)		   1 MDEKGRSLKNNNMEDEMDLKRGPWTAEEDFKLMNYIATNGEGRWNSLSRCAGLQRTGKSC   60
  61 RLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQ  120
 121 KHAKQLKCDVNSQQFKDTMKYLWMPRLVERIQSASASSAAAATTTTTTTTGSAGTSSCIT  180
 181 TSNNQFMNYDYNNNNMGQQFGVMSNNDYITPENSSVAVSPASDLTEYYSAPNPNPEYYSG  240
 241 QMGNSYYPDQNLVSSQLLPDNYFDYSGLLDEDLTAMQEQSNLSWFENINGAASSSDSLWN  300
 301 IGETDEEFWFLQQQQQFNNNGSF*
Interface Residues: 21, 56, 57, 58, 59, 61, 62, 66, 67, 108, 109, 112, 113, 116, 117, 118
3D-footprint Homologues: 3osg_A, 2kdz_A, 7xur_A, 3zqc_A, 1mse_C, 6kks_A
Binding Motifs: AtMYB108_I wvmdGTTr
AtMYB108_II GTwrGTTr
Binding Sites: AAAAGTTA
ACAAGTTA
AGGTTA
GTTAGTTG
TACTGTTG
TGCGGTTG
			
Publications: Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.