Transcription Factor

Accessions: AtMYB69 (AthaMYB 1.0)
Names: AtMYB69, Myb domain protein 69, MYB transcription factor, Putative transcription factor
Organisms: Arabidopsis thaliana
Libraries: AthaMYB 1.0 1
1 Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Uniprot: Q9SZC2
Length: 251
Pfam Domains: 19-64 Myb-like DNA-binding domain
22-82 Myb-like DNA-binding domain
71-114 Myb-like DNA-binding domain
74-127 Myb-like DNA-binding domain
Sequence:
(in bold interface residues)
1 MEMSRGSNSFDNKKPSCQRGHWRPVEDDNLRQLVEQYGPKNWNFIAQHLYGRSGKSCRLR 60
61 WYNQLDPNITKKPFTEEEEERLLKAHRIQGNRWASIARLFPGRTDNAVKNHFHVIMARRK 120
121 RENFSSTATSTFNQTWHTVLSPSSSLTRLNRSHFGLWRYRKDKSCGLWPYSFVSPPTNGQ 180
181 FGSSSVSNVHHEIYLERRKSKELVDPQNYTFHAATPDHKMTSNEDGPSMGDDGEKNDVTF 240
241 IDFLGVGLAS*
Interface Residues: 3, 4, 8, 19, 53, 54, 55, 56, 58, 59, 63, 64, 66, 68, 70, 105, 106, 109, 110, 113, 114, 115, 121
3D-footprint Homologues: 7xur_A, 1w0t_A, 3osg_A, 2kdz_A, 5eyb_B, 3zqc_A, 1mse_C, 6kks_A, 8ity_W, 5n9g_C, 1puf_B
Binding Motifs: AtMYB69_I wamaGTTr
AtMYB69_II GywdGTTr
Binding Sites: GTTAGTTA
AAAAGTTA
ACAAGTTA
AGGTTA
GCTTGTTG
GTCAGTTA
TACTGTTG
TGCGGTTG
Publications: Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Related annotations: PaperBLAST

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.