Transcription Factor

Accessions: AtMYB37 (AthaMYB 1.0)
Names: AtMYB37, Myb-related protein 37, Protein REGULATOR OF AXILLARY MERISTEMS 1, RAX1, Transcription factor RAX1
Organisms: Arabidopsis thaliana
Libraries: AthaMYB 1.0 1
1 Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Uniprot: Q9FG68
Length: 330
Pfam Domains: 14-62 Myb-like DNA-binding domain
17-77 Myb-like DNA-binding domain
69-111 Myb-like DNA-binding domain
71-117 Myb-like DNA-binding domain
Sequence:
(in bold interface residues)
1 MGRAPCCDKTKVKRGPWSPEEDSKLRDYIEKYGNGGNWISFPLKAGLRRCGKSCRLRWLN 60
61 YLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLPGRTDNDIKNYWNTKLRKKLLSS 120
121 SSDSSSSAMASPYLNPISQDVKRPTSPTTIPSSSYNPYAENPNQYPTKSLISSINGFEAG 180
181 DKQIISYINPNYPQDLYLSDSNNNTSNANGFLLNHNMCDQYKNHTSFSSDVNGIRSEIMM 240
241 KQEEIMMMMMIDHHIDQRTKGYNGEFTQGYYNYYNGHGDLKQMISGTGTNSNINMGGSGS 300
301 SSSSISNLAENKSSGSLLLEYKCLPYFYS*
Interface Residues: 14, 50, 51, 52, 53, 55, 56, 59, 60, 61, 102, 103, 106, 107, 110, 111, 112
3D-footprint Homologues: 3osg_A, 1w0t_A, 2kdz_A, 7xur_A, 6kks_A, 1mse_C, 3zqc_A, 5eyb_B
Binding Motifs: AtMYB37_II GCTTGTTG
AtMYB37_I wtcaGTTr
Binding Sites: ACAAGTTA
ATTAGTTG
GCTTGTTG
GTCAGTTA
TACTGTTG
TGCGGTTG
Publications: Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Related annotations: PaperBLAST

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.