Transcription Factor
| Accessions: | O81900 (JASPAR 2024) |
| Names: | AtbHLH22, Basic helix-loop-helix protein 22, bHLH 22, bHLH transcription factor bHLH022, DYT1_ARATH, Protein DYSFUNCTIONAL TAPETUM 1, Transcription factor DYT1, Transcription factor EN 49 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | O81900 |
| Length: | 207 |
| Pfam Domains: | 35-78 Helix-loop-helix DNA-binding domain |
| Sequence: (in bold interface residues) | 1 MGGGSRFQEPVRMSRRKQVTKEKEEDENFKSPNLEAERRRREKLHCRLMALRSHVPIVTN 60 61 MTKASIVEDAITYIGELQNNVKNLLETFHEMEEAPPEIDEEQTDPMIKPEVETSDLNEEM 120 121 KKLGIEENVQLCKIGERKFWLKIITEKRDGIFTKFMEVMRFLGFEIIDISLTTSNGAILI 180 181 SASVQTQELCDVEQTKDFLLEVMRSNP |
| Interface Residues: | 32, 33, 34, 36, 37, 40, 41, 61, 63 |
| 3D-footprint Homologues: | 1an4_A, 7ssa_L, 5gnj_I, 5i50_B |
| Binding Motifs: | MA0580.1 mrtgArwCACGTGA |
| Publications: | Feng B, Lu D, Ma X, Peng Y, Sun Y, Ning G, Ma H. Regulation of the Arabidopsis anther transcriptome by DYT1 for pollen development. The Plant journal : for cell and molecular biology 72:612-24 (2012). [Pubmed] |
| Related annotations: | PaperBLAST |
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