Transcription Factor
| Accessions: | CG3407 (FlyZincFinger 1.0 ) |
| Names: | CG3407 |
| Organisms: | Drosophila melanogaster |
| Libraries: | FlyZincFinger 1.0 1 1 Enuameh MS et al (2013) Global analysis of Drosophila Cys2-His2 zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants. Genome Res. 23(6):928-40. doi: 10.1101/gr.151472.112 [Pubmed] |
| Notes: | family:Cys2His2 zinc finger |
| Length: | 504 |
| Pfam Domains: | 336-357 C2H2-type zinc finger 348-373 Zinc-finger double domain 362-384 Zinc finger, C2H2 type 362-384 C2H2-type zinc finger 376-400 Zinc-finger double domain 390-413 Zinc finger, C2H2 type 390-413 C2H2-type zinc finger 404-430 Zinc-finger double domain 419-441 Zinc finger, C2H2 type 421-441 C2H2-type zinc finger 433-456 Zinc-finger double domain 447-469 Zinc finger, C2H2 type 447-469 C2H2-type zinc finger 462-484 Zinc-finger double domain 475-497 Zinc finger, C2H2 type 475-495 C2H2-type zinc finger |
| Sequence: (in bold interface residues) | 1 PSSLYSCEICGYAVHTQLDFFAHLKQHYEPTVLEQRLVVQDPQQQHQQKEPLDMCGLSAQ 60 61 DKLQQEQAKLDQVFQDVQLNFENFHNISHHVNDVANVGVNMVLHGQATDKLNAVVVNTSS 120 121 TPNSVPVVDDVEFSDTEDMLEGIRNVVDKVSIEDTCDELVDLELTSSGMTAPWFNNNFRD 180 181 ITFPALLLPGEPPPASSEPATPLLKENPHVGDHMALDFLSPEKADPQEEAKLEKTLSKAC 240 241 EPNEQTLLVAPPACQTPPIPTVPPANSSIEQLRRSPLELSEAFKLEEDDMTDSRPASSFE 300 301 EGDPDAEEPNECFQMEVLDTSLTEEAENKTRRKHFCDKCNRDFNSYNALKYHQYTHNQER 360 361 SHKCDSCERSFYTQSALKAHERTHSGVKPFKCDKCEFQFRQWGDLKYHIISRHSDVKAHM 420 421 CEFCGKSFSRRYSLVVHRRIHTREKNYACQYCDKTFRASSYLLSHIKVHTGERPYECSIC 480 481 EKKFRVSGDLKRHSRIHDPSRTSQ |
| Interface Residues: | 318, 319, 320, 345, 347, 348, 351, 372, 373, 374, 375, 376, 378, 379, 381, 382, 385, 401, 402, 403, 404, 405, 406, 407, 411, 414, 415, 418, 429, 430, 431, 432, 433, 435, 436, 442, 456, 457, 458, 459, 460, 461, 463, 464, 465, 468, 485, 486, 487, 488, 489, 490, 491, 492, 493, 495, 496 |
| 3D-footprint Homologues: | 5v3j_F, 6wmi_A, 8ssq_A, 7w1m_H, 5und_A, 8ssu_A, 1tf6_A, 2i13_A, 1ubd_C, 8cuc_F, 7n5w_A, 5k5i_A, 6ml4_A, 5kkq_D, 5ei9_F, 7eyi_G, 8h9h_G, 6e94_A, 2jpa_A, 2drp_D, 5k5l_F, 7txc_E, 7ysf_A, 5yel_A, 2gli_A, 1tf3_A, 6jnm_A, 5kl3_A, 2kmk_A, 1g2f_F, 4x9j_A, 6blw_A, 6u9q_A, 1mey_C, 2lt7_A, 6a57_A, 3uk3_C, 7y3l_A, 1f2i_J, 8gn3_A, 1llm_D, 2wbs_A, 4m9v_C, 7y3m_I, 5yj3_D |
| Binding Motifs: | CG3407_SANGER_2.5_FBgn0031573 awGTCAAsm CG3407_SOLEXA_2.5_FBgn0031573 wwGTCAAshschaammavmmmamma |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.