Transcription Factor
Accessions: | Q9FMC2 (JASPAR 2024), T24625 (AthalianaCistrome v4_May2016) |
Names: | AtbZIP43, Basic leucine zipper 43, bZIP protein 43, BZP43_ARATH, AT5G38800, bZIP43, T24625; |
Organisms: | Arabidopsis thaliana |
Libraries: | JASPAR 2024 1, AthalianaCistrome v4_May2016 2 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] 2 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed] |
Notes: | ecotype:Col-0, experiment type: DAP-seq, family:bZIP |
Length: | 165 |
Pfam Domains: | 70-116 Basic region leucine zipper 72-117 bZIP transcription factor |
Sequence: (in bold interface residues) | 1 MQPSTNIFSLHGCPPSYLSHIPTSSPFCGQNPNPFFSFETGVNTSQFMSLISSNNSTSDE 60 61 AEENHKEIINERKQKRKISNRESARRSRMRKQRQVDELWSQVMWLRDENHQLLRKLNCVL 120 121 ESQEKVIEENVQLKEETTELKQMISDMQLQNQSPFSCIRDDDDVV |
Interface Residues: | 76, 79, 80, 81, 83, 84, 87, 88 |
3D-footprint Homologues: | 1gd2_G |
Binding Motifs: | M0232 / MA1339.1 kCCACGTCAGCa |
Publications: | Martinez-Garcia J. F., Moyano E., Alcocer M. J. C., Martin C. Two bZIP proteins from Antirrhinum flowers preferentially bind a hybrid C-box/G-box motif and help to define a new sub-family of bZIP transcription factors.. Plant J. 13:489-505 (1998). [Pubmed] |
Related annotations: | PaperBLAST |
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