Transcription Factor
| Accessions: | Q6P6L4 (JASPAR 2024) |
| Names: | Q6P6L4_MOUSE |
| Organisms: | Mus musculus |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | Q6P6L4 |
| Length: | 459 |
| Pfam Domains: | 23-125 BTB/POZ domain 359-379 Zinc-finger of C2H2 type 359-381 Zinc finger, C2H2 type 360-381 C2H2-type zinc finger 373-397 Zinc-finger double domain 387-409 C2H2-type zinc finger 387-409 Zinc finger, C2H2 type 405-426 Zinc-finger double domain 415-438 C2H2-type zinc finger |
| Sequence: (in bold interface residues) | 1 MASGVEVLRFQLPGHEAATLRNMNQLRAEERFCDVTIVADSLKFRGHKVILAACSPFLRD 60 61 QFLLNPSSELQVSLMHSARIVADLLLSCYTGALEFAVRDIVNYLTAASYLQMEHVVEKCR 120 121 NALSQFIEPKIGLKEDGVSEASLLSSVSATKSLLPPARTPKPAPKPPPPPPLPPPLLRPV 180 181 KLEFPLDEDLELKAEEEDEDEDEDVSDICIVKVESALEVAHRLKPPGSLAGGLGIGASVS 240 241 SHLGELAQSSVAPNTVTPPQGVVKACYSLSEDAEGEGLLLIPGGRASVGATSGLVEAAAV 300 301 AMAARGAGGSLGAGGSRGPLPGGFSSGNPLKNIKCTKCPEVFQGVEKLVFHMRAQHFIFM 360 361 CPRCGKQFNHSSNLNRHMNVHRGVKSHSCGICGKCFTQKSTLHDHLNLHSGARPYRCSYC 420 421 DVRFAHKPAIRRHLKEQHGKTTAENVLEAGLAEINVLIR |
| Interface Residues: | 139, 344, 345, 346, 347, 350, 354, 359, 369, 370, 371, 372, 373, 375, 376, 377, 397, 398, 399, 400, 401, 402, 403, 404, 405, 425, 426, 427, 428, 429, 430, 431, 432, 434, 436, 453, 455, 456, 459 |
| 3D-footprint Homologues: | 3x1l_D, 8ssq_A, 5und_A, 8ssu_A, 6ml4_A, 5v3j_F, 5kkq_D, 5yel_A, 5ei9_F, 7eyi_G, 6wmi_A, 2i13_A, 6e94_A, 2kmk_A, 6jnm_A, 8cuc_F, 7y3l_A, 7n5w_A, 1tf3_A, 1g2f_F, 5k5i_A, 1tf6_A, 7w1m_H, 1ubd_C, 4x9j_A, 2jpa_A, 8gn3_A, 1mey_C, 6blw_A, 2drp_D, 1f2i_J, 6u9q_A, 5kl3_A, 2gli_A, 7ysf_A, 4m9v_C, 8h9h_G, 2lt7_A, 6a57_A, 3uk3_C, 1llm_D, 2wbs_A, 7txc_E, 7y3m_I, 5yj3_D, 5k5l_F |
| Binding Motifs: | PB0090.1 stwrkGTTCTAGAtymy PB0194.1 wmtcrTTAGAACbyt |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.