Transcription Factor
| Accessions: | P54269 (JASPAR 2024) |
| Names: | CAUP_DROME |
| Organisms: | Drosophila melanogaster |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | P54269 |
| Length: | 693 |
| Pfam Domains: | 229-286 Homeobox domain 244-283 Homeobox KN domain |
| Sequence: (in bold interface residues) | 1 MAAYAQFGYAGYPTANQLTTANTDSQSGHGGGSPLSGTNEASLSPSGGSTATGLTAGPLS 60 61 PGAVSQSSHHAGHKGLSTSPAEDVVGGDVPVGLSSAAQDLPSRGSCCENGRPIITDPVSG 120 121 QTVCSCQYDPARLAIGGYSRMALPSGGVGVGVYGGPYPSNEQNPYPSIGVDNSAFYAPLS 180 181 NPYGIKDTSPSTEMSAWTSASLQSTTGYYSYDPTLAAYGYGPNYDLAARRKNATRESTAT 240 241 LKAWLSEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNKTED 300 301 DDDGMMSDDEKEKDAGDGGKLSTEAFDPGNQLIKSELGKAEKEVDSSGDQKLDLDREPHN 360 361 LVAMRGLAPYATPPGAHPMHAAYSSYAQSHNTHTHPHPQQMQHHQQQQQQQQNQQQLQHH 420 421 QMDQPYYHPGGYGQEESGEFAAQKNPLSRDCGIPVPASKPKIWSVADTAACKTPPPTAAY 480 481 LGQNFYPPSSADQQLPHQPLQQHQQQQLQQLQQQQQHHHHPHHHHPHHSMELGSPLSMMS 540 541 SYAGGSPYSRIPTAYTEAMGMHLPSSSSSSSSTGKLPPTHIHPAPQRVGFPEIQPDTPPQ 600 601 TPPTMKLNSSGGSSSSSGSSHSSSMHSVTPVTVASMVNILYSNTDSGYGHGHSHGHGHGH 660 661 GHGLGHGHGLGHGHGHMGVTSNAYLTEGGRSGS |
| Interface Residues: | 226, 229, 230, 231, 232, 233, 237, 271, 272, 274, 275, 278, 279, 280, 282, 283, 285, 286, 295 |
| 3D-footprint Homologues: | 3a01_E, 6m3d_C, 6fqp_B, 5zjt_E, 4cyc_A, 5hod_A, 3cmy_A, 1fjl_B, 5jlw_D, 3d1n_M, 2hdd_A, 2r5y_A, 1puf_B, 1ig7_A, 5zfz_A, 2hos_A, 2lkx_A, 2ld5_A, 4xrs_G, 3rkq_B, 2h1k_B, 1nk2_P, 1b72_A, 5flv_I, 2d5v_B, 1k61_B, 1o4x_A, 1du0_A, 7psx_B, 1le8_B, 4xrm_B, 1puf_A, 1mnm_C, 6fqq_E |
| Binding Motifs: | MA0217.1 tAACA |
| Binding Sites: | MA0217.1.3 MA0217.1.1 MA0217.1.10 MA0217.1.11 MA0217.1.12 MA0217.1.13 MA0217.1.14 MA0217.1.15 MA0217.1.16 MA0217.1.17 MA0217.1.18 MA0217.1.19 MA0217.1.2 MA0217.1.20 MA0217.1.4 MA0217.1.5 MA0217.1.6 MA0217.1.7 MA0217.1.8 MA0217.1.9 |
| Publications: | Noyes M.B, Meng X, Wakabayashi A, Sinha S, Brodsky M.H, Wolfe S.A. A systematic characterization of factors that regulate Drosophila segmentation via a bacterial one-hybrid system. Nucleic acids research 36:2547-60 (2008). [Pubmed] |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.