Transcription Factor

Accessions: AtMYB95 (AthaMYB 1.0)
Names: 31729-33438, At1g74430, AtMYB95, MYB transcription factor, Putative MYB family transcription factor, Putative transcription factor, Putative transcription factor MYB95
Organisms: Arabidopsis thaliana
Libraries: AthaMYB 1.0 1
1 Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Uniprot: Q9SG63
Length: 272
Pfam Domains: 14-61 Myb-like DNA-binding domain
17-76 Myb-like DNA-binding domain
67-111 Myb-like DNA-binding domain
70-119 Myb-like DNA-binding domain
Sequence:
(in bold interface residues)
1 MGRTTWFDVDGLRKGEWTAEEDRKLVVYINEHGLGEWGSLPKRAGLQRCGKSCRLRWLNY 60
61 LRPGIKRGKFTPQEEEEIIKYHALLGNRWAAIAKQMPNRTDNDIKNHWNSCLKKRLAKKG 120
121 IDPMTHEPTTTTSLTVDVTSSSTTSSPTPSPTSSSFSSCSSTGSARFLNKLAAGISSRKH 180
181 GLESIKTVILAEQPREAVDEEKMMTINMKEKELISCYMEIDETMSIDELPCDDSTSGFVA 240
241 FDDYSLIDPYRDGVYVSDFYDETEHLDLFLL*
Interface Residues: 14, 46, 49, 50, 51, 52, 54, 55, 58, 59, 60, 101, 102, 105, 106, 109, 110, 111
3D-footprint Homologues: 1vfc_A, 3osg_A, 2kdz_A, 3zqc_A, 5eyb_B, 6kks_A, 1mse_C, 7xur_A
Binding Motifs: AtMYB95_I awmAGTTr
AtMYB95_II RkTdGTTr
Binding Sites: GTTAGTTA
AAAAGTTA
ACAAGTTA
AGGTTA
AGTAGTTA
AGTGGTTA
ATTAGTTG
GCTTGTTG
GGTTGGTG
GTCAGTTA
GTTAGTTG
TACTGTTG
Publications: Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Related annotations: PaperBLAST

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.