Transcription Factor

Accessions: O23487 (JASPAR 2024)
Names: AtbHLH3, Basic helix-loop-helix protein 3, BH003_ARATH, bHLH 3, bHLH transcription factor bHLH003, Transcription factor bHLH3, Transcription factor EN 34
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Uniprot: O23487
Length: 467
Pfam Domains: 50-226 bHLH-MYC and R2R3-MYB transcription factors N-terminal
320-366 Helix-loop-helix DNA-binding domain
Sequence:
(in bold interface residues)
1 MGQKFWENQEDRAMVESTIGSEACDFFISTASASNTALSKLVSPPSDSNLQQGLRHVVEG 60
61 SDWDYALFWLASNVNSSDGCVLIWGDGHCRVKKGASGEDYSQQDEIKRRVLRKLHLSFVG 120
121 SDEDHRLVKSGALTDLDMFYLASLYFSFRCDTNKYGPAGTYVSGKPLWAADLPSCLSYYR 180
181 VRSFLARSAGFQTVLSVPVNSGVVELGSLRHIPEDKSVIEMVKSVFGGSDFVQAKEAPKI 240
241 FGRQLSLGGAKPRSMSINFSPKTEDDTGFSLESYEVQAIGGSNQVYGYEQGKDETLYLTD 300
301 EQKPRKRGRKPANGREEALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAIT 360
361 YITDMQKKIRVYETEKQIMKRRESNQITPAEVDYQQRHDDAVVRLSCPLETHPVSKVIQT 420
421 LRENEVMPHDSNVAITEEGVVHTFTLRPQGGCTAEQLKDKLLASLSQ
Interface Residues: 321, 322, 324, 325, 328, 329, 333, 349, 351
3D-footprint Homologues: 7xi3_A, 5gnj_I, 6g1l_A, 4h10_A, 7xq5_A, 5i50_B, 7d8t_A, 4zpk_A, 5nj8_D, 7ssa_L, 5eyo_A, 5v0l_A, 8osl_P, 1an4_A, 7z5k_B
Binding Motifs: MA0957.1 rCACGTGy
Publications: Fernández-Calvo P, Chini A, Fernández-Barbero G, Chico J.M, Gimenez-Ibanez S, Geerinck J, Eeckhout D, Schweizer F, Godoy M, Franco-Zorrilla J.M, Pauwels L, Witters E, Puga M.I, Paz-Ares J, Goossens A, Reymond P, De Jaeger G, Solano R. The Arabidopsis bHLH transcription factors MYC3 and MYC4 are targets of JAZ repressors and act additively with MYC2 in the activation of jasmonate responses. The Plant cell 23:701-15 (2011). [Pubmed]
Related annotations: PaperBLAST

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.