Transcription Factor
| Accessions: | T090147_1.02 (CISBP 1.02) |
| Names: | AGAP006642, T090147_1.02; |
| Organisms: | Anopheles gambiae |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:Homeodomain |
| Length: | 737 |
| Pfam Domains: | 283-349 Homeobox domain 633-690 Homeobox domain |
| Sequence: (in bold interface residues) | 1 MTVSSKTKSLPLHCVVESVSSLQATLNFDTRSPWKRRPNIETDSYVIIPAATPFCDIVTT 60 61 ALQRLGYSTEISNAARGSISIKNWKSLSLDAISDNPLVSVSDILGELTSVVTLKITILRN 120 121 KPSQLAEIKDKLLKLLILQSHALLRSTGCPLDEITLSQICRSPLQNTFPFTPEITDETRR 180 181 NFDQWWSNQLAPQPNPIAHKILPFANPQPSDHLDFSAHGFPSLHGVKRDAAGSLLAGDGG 240 241 AAAAAAAAAAAAAVAHHTNQHHNLVVHPALQTVHSQYPNQKTRMRTSFDPEMELPKLQRW 300 301 FQENPHPSRQQIQSYVVQLNSLESRRGRKPLDVNNVVYWFKNARAAQKRAEMRQGMTNGF 360 361 GTPGMMLSQADYMKSSPSAPSEDIDNLSQDEMDDELDRAMSPQLPLSLTIHERNHPLTPS 420 421 DTHPTPIKQEQHGGSASPPPSPSPNHEHSAGNSNAAAGGAGGSSSSNGNSGVGLNASGIS 480 481 LNNNNNNNSSTNNNNNNNNNGNNESSVNDSTLNDEPKSNYSNERSNSPQRSSRSPASEDL 540 541 DMDEPDVSNMDDYRSPSPDSKRQLPFPMNNPMLSHSIMYMSHYIPAMQGAAGMHLKSEFA 600 601 PGGHGPLGQGGLNLSFNSDERRKRNRTFIDPVTEVPKLEQWFSMNTHPSHNLILKYTEDL 660 661 NRMPYRQKFPRLESKNVQFWFKNRRAKCKRLKMSLYDPAQLANLGEQAHLAALHDAPHLS 720 721 GLHEASQMHPFHHGDRD |
| Interface Residues: | 282, 283, 285, 338, 341, 342, 345, 346, 614, 618, 626, 675, 678, 679, 682, 683, 686, 687, 690 |
| 3D-footprint Homologues: | 3d1n_M, 2lkx_A, 3l1p_A, 1b72_A, 6wig_A, 4j19_B, 1e3o_C, 1au7_A, 5jlw_D, 1ig7_A, 7q3o_C, 6ryd_F, 4cyc_A, 2h1k_B, 5hod_A, 2hdd_A, 1o4x_A, 4qtr_D, 6es3_K, 3lnq_A, 1puf_A, 5flv_I, 3cmy_A |
| Binding Motifs: | M0838_1.02 gyTAATCY |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.