Transcription Factor

						

			
Accessions: Q41026 (JASPAR 2024)

			
Names: Q41026_PEA
Organisms: Pisum sativum
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 154
Pfam Domains:    42-110 Domain of unknown function (DUF1898)
   45-114 HMG (high mobility group) box
Sequence: 
(in bold interface residues)		   1 MKGGKSKGESKKAETKLAVNKKGAPATKGGKKPAKGKEPKDPNKPKRPPSAFFVFMEDFR   60
  61 KQFKKGNADNKAVSAVGKAAGAKWKSMTEAEKAPYAAKAEKRKAEYEKSMKSYNKKQAEG  120
 121 PAAVEEEEESEKSESEVHDENDDEEESEEEDDDE
Interface Residues: 37, 47, 50, 52, 53, 56, 60, 61, 69, 70, 71, 72, 73, 74, 77
3D-footprint Homologues: 3tmm_A, 3tq6_B, 4s2q_D, 1qrv_A, 4y60_C, 2gzk_A, 1j5n_A, 2lef_A, 3u2b_C, 1o4x_B, 3f27_D, 1hry_A, 1ckt_A
Binding Motifs: MA0044.1 sTYGTayTy
Binding Sites: MA0044.1.1
MA0044.1.10
MA0044.1.11
MA0044.1.12
MA0044.1.13
MA0044.1.2
MA0044.1.3
MA0044.1.4
MA0044.1.5
MA0044.1.6
MA0044.1.7
MA0044.1.8
MA0044.1.9
			
Publications: Webster C.I, Packman L.C, Pwee K.H, Gray J.C. High mobility group proteins HMG-1 and HMG-I/Y bind to a positive regulatory region of the pea plastocyanin gene promoter. The Plant journal : for cell and molecular biology 11:703-15 (1997). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.