Transcription Factor

Accessions: GerE (DBTBS 1.0)
Names: GerE, GERE_BACSU
Organisms: Bacillus subtilis
Libraries: DBTBS 1.0 1
1 Sierro N, Makita Y, de Hoon M, Nakai K. DBTBS: a database of transcriptional regulation in Bacillus subtilis containing upstream intergenic conservation information. Nucleic acids research 36:D93-6 (2008). [Pubmed]
Uniprot: P11470
Length: 74
Pfam Domains: 11-64 Bacterial regulatory proteins, luxR family
12-54 Sigma-70, region 4
12-54 Sigma-70, region 4
Sequence:
(in bold interface residues)
1 MKEKEFQSKPLLTKREREVFELLVQDKTTKEIASELFISEKTVRNHISNAMQKLGVKGRS 60
61 QAVVELLRMGELEL
Interface Residues: 39, 40, 41, 42, 44, 45, 46, 48
3D-footprint Homologues: 7ve5_B, 5w43_B, 8dq1_C, 1je8_F, 6ide_A, 1zlk_A, 4wuh_B
Binding Motifs: GerE RwwTrGGcrtwy
Binding Sites: cgeA_1
cgeA_2
cgeA_3
cgeA_4
cgeA_5
cgeC_1
cotB_1
cotB_2
cotC_1
cotC_2
cotD_1
cotD_2
cotG_1
cotH_1
cotM_1
cotV_1
cotX_1
cotX_2
cotY_1
cotY_2
cwlH_1
ftsY_1
ftsY_2
spoIVCB_1
spoIVCB_2
sspG_1
sspG_2
ydgB_1
yjcZ_1
Related annotations: PaperBLAST

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