Transcription Factor

Accessions: 9ant_B (3D-footprint 20231221)
Names: ANTENNAPEDIA HOMEODOMAIN, ANTP_DROME
Organisms: Drosophila melanogaster
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Uniprot: P02833
Length: 56
Pfam Domains: 1-54 Homeobox domain
Sequence:
(in bold interface residues)
1 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALSLTERQIKIWFQNRRMKWKKEN
Interface Residues: 1, 24, 39, 40, 42, 43, 46, 47, 50, 51, 54
3D-footprint Homologues: 3rkq_B, 2r5y_A, 1jgg_B, 6a8r_A, 4xrs_G, 3d1n_M, 2hos_A, 7q3o_C, 4cyc_A, 6es3_K, 5flv_I, 2ld5_A, 1fjl_B, 5zfz_A, 3a01_E, 2h1k_B, 6m3d_C, 1b72_A, 5hod_A, 3lnq_A, 1puf_A, 1ig7_A, 5zjt_E, 3cmy_A, 2hdd_A, 7psx_B, 5jlw_D, 5trd_B, 1e3o_C, 2xsd_C, 1au7_A, 7xrc_C, 4j19_B, 1le8_A, 1puf_B, 1nk2_P, 1zq3_P, 1k61_B, 3l1p_A, 1o4x_A, 2lkx_A, 8g87_X, 4qtr_D, 1mnm_C, 1du0_A
Binding Motifs: 9ant_B CTAATAG
Binding Sites: 9ant_E
9ant_F
Publications: Fraenkel E, Pabo C.O. Comparison of X-ray and NMR structures for the Antennapedia homeodomain-DNA complex. Nature structural biology 5:692-7 (1998). [Pubmed]
Related annotations: PaperBLAST

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