Transcription Factor
| Accessions: | T061555_1.02 (CISBP 1.02), P32432 (JASPAR 2024) |
| Names: | SFP1, T061555_1.02;, SFP1_YEAST, Split finger protein 1, Transcription factor SFP1 |
| Organisms: | Saccharomyces cerevisiae |
| Libraries: | CISBP 1.02 1, JASPAR 2024 2 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] 2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | experiment type:PBM, family:C2H2 ZF |
| Length: | 683 |
| Sequence: (in bold interface residues) | 1 MDFTTMTMASNMATSTTTTATSAHASINSSSNFNIDIDSNQNTPSILINNNSDSSNGKNT 60 61 DFNGVNNIHQKNIMNNTNNVHLYSPNIMDQTLLTPQDIAKLRRESIAHSQGMGGVSWGSI 120 121 SVGSWLRDEIISRRNSIVPASANGAASAAASATTTATNTLQIQQPTKRPSVSNPPYHRGY 180 181 SISPQIAYTAYLPNLEKQYCKDYSCCGLSLPGLHDLLRHYEEAHISTSPNTTNMSQIPMN 240 241 SAGNTSSSVRMTNNTSSANYNLQNNMAANTKNAGHKTNTMQAHSSNATNNTSINNMHANL 300 301 QSNMDSNSTIRQSQHPHHQQNIIQQQLQSNSVNHTSGAVPTPSVMGSATASSTTANPNVI 360 361 SITGAPNSGLSMANHSQQLHLNGNLVDAVSTNDVFLRTSNSPSRHVPHNKQINSNNNSGI 420 421 NINNNTSHNSNINMGSKNAMVNRPHTFNNYSLNKTSRNPIQHQSRKIDPHQTDLSPLVLV 480 481 QDIDLSFMDDDILGPSNHNSMNSVVNPTTGSHNYNTFHSSVHAKSSQNMVEDQDIDDIDD 540 541 DDDVDDDDDDDDDDDTENGSSSNGKSVHNNNYKMPQQAYIDDPARRLYVMDHEEQKPFKC 600 601 PVIGCEKTYKNQNGLKYHRLHGHQNQKLHENPDGTFSVIDPDSTDSFGDGMGSAKDKPYR 660 661 CEVCGKRYKNLNGLKYHRGHSTH |
| Interface Residues: | 580, 581, 582, 583, 584, 585, 587, 610, 611, 613, 614, 616, 617, 618, 619, 621, 622, 624, 625, 628, 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649, 650, 653, 669, 670, 671, 672, 673, 675, 676, 677 |
| 3D-footprint Homologues: | 1tf3_A, 7ysf_A, 6ml4_A, 2i13_A, 1tf6_A, 6wmi_A, 1mey_C, 7eyi_G, 5ei9_F, 2gli_A, 5kkq_D, 1g2f_F, 4x9j_A, 1ubd_C, 6blw_A, 2jpa_A, 7txc_E, 2kmk_A, 3uk3_C, 7n5w_A, 8h9h_G, 6u9q_A, 1llm_D, 7y3m_I, 4m9v_C, 6e94_A |
| Binding Motifs: | MA0378.1 wywrdrAAAAwTTTTyywykg M0530_1.02 GAAAAAAw MA0378.2 rAAAAwTTTT |
| Publications: | Newburger D.E, Bulyk M.L. UniPROBE: an online database of protein binding microarray data on protein-DNA interactions. Nucleic acids research 37:D77-82 (2009). [Pubmed] |
| Related annotations: | PaperBLAST |
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