Transcription Factor
| Accessions: | P13434 (JASPAR 2024) |
| Names: | HAP3_YEAST, Transcriptional activator HAP3, UAS2 regulatory protein A |
| Organisms: | Saccharomyces cerevisiae |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 144 |
| Pfam Domains: | 40-103 Histone-like transcription factor (CBF/NF-Y) and archaeal histone 42-106 Core histone H2A/H2B/H3/H4 |
| Sequence: (in bold interface residues) | 1 MNTNESEHVSTSPEDTQENGGNASSSGSLQQISTLREQDRWLPINNVARLMKNTLPPSAK 60 61 VSKDAKECMQECVSELISFVTSEASDRCAADKRKTINGEDILISLHALGFENYAEVLKIY 120 121 LAKYRQQQALKNQLMYEQDDEEVP |
| Interface Residues: | 45, 60, 63, 120, 133, 135, 136 |
| 3D-footprint Homologues: | 6r2v_B, 4awl_B, 4g92_B, 7wlr_E, 5t5k_E, 7cvo_B, 2fr4_L, 8b4h_A |
| Binding Motifs: | MA0314.1 tcTsATTGGyyvrra MA0314.2 kcTGATTGGyyc MA0314.3 TGATTGGyy |
| Binding Sites: | MA0314.2.1 / MA0314.2.2 / MA0314.2.4 / MA0314.2.5 MA0314.2.10 / MA0314.2.11 / MA0314.2.12 / MA0314.2.9 MA0314.2.10 / MA0314.2.11 MA0314.2.12 / MA0314.2.13 MA0314.2.14 / MA0314.2.15 / MA0314.2.16 / MA0314.2.17 / MA0314.2.18 / MA0314.2.20 MA0314.2.16 / MA0314.2.19 MA0314.2.3 / MA0314.2.4 MA0314.2.5 MA0314.2.6 MA0314.2.7 MA0314.2.8 MA0314.2.9 MA0314.2.13 / MA0314.2.14 / MA0314.2.15 / MA0314.2.17 MA0314.2.3 MA0314.3.1 / MA0314.3.13 / MA0314.3.2 / MA0314.3.4 MA0314.3.10 / MA0314.3.12 MA0314.3.11 / MA0314.3.14 / MA0314.3.15 / MA0314.3.17 / MA0314.3.18 / MA0314.3.20 MA0314.3.16 / MA0314.3.19 MA0314.3.3 / MA0314.3.9 MA0314.3.5 MA0314.3.6 MA0314.3.7 MA0314.3.8 |
| Publications: | Pachkov M, Erb I, Molina N, van Nimwegen E. SwissRegulon: a database of genome-wide annotations of regulatory sites. Nucleic acids research 35:D127-31 (2007). [Pubmed] |
| Related annotations: | PaperBLAST |
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