Transcription Factor

						

			
Accessions: A0A090M8Q1 (JASPAR 2024)

			
Names: A0A090M8Q1_OSTTA
Organisms: Ostreococcus tauri
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 331
Pfam Domains:   171-194 Zinc-finger double domain
  183-206 Zinc finger, C2H2 type
  183-206 C2H2-type zinc finger
  214-238 C2H2-type zinc finger
  244-268 C2H2-type zinc finger
Sequence: 
(in bold interface residues)		   1 MGRRREHGLWRRRFLNELSSATAHAECTLADACELAYGCERLREVFRRAQGAENEDGGGT   60
  61 REGWRARFERATPRDVAAALGEIRGLLKVVDEETYARGIDGDADVAIEGDEPMGERGRGR  120
 121 AGARRAECPFCKKKFVESHLPSHVAKQHTGARPVKCSHVGCDEYFADERAMRRHVVLIHE  180
 181 QKYKCGVCGKAFSTKQMQERHEDSAHAERKKTIPCPVDGCTVMFSNVGSISDHMKRAHSN  240
 241 AKPYACTYPGCSAKFATSSDKARHFRTHFGDNARPGAASRSMSVHLSQSRSELVRKRSCA  300
 301 RSFEDDLVPELTDPSLMSKWLLVGGDEASEL
Interface Residues: 108, 111, 114, 118, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 149, 162, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 193, 194, 195, 196, 197, 199, 200, 204, 225, 226, 227, 228, 229, 231, 232, 233, 256, 257, 258, 259, 260, 262, 263, 274, 276, 277, 280
3D-footprint Homologues: 5kkq_D, 3uk3_C, 5v3j_F, 7w1m_H, 8ssu_A, 6ml4_A, 5und_A, 2kmk_A, 6u9q_A, 8ssq_A, 7y3m_I, 4m9v_C, 5yel_A, 2jpa_A, 2i13_A, 5k5i_A, 7ysf_A, 5ei9_F, 8gn3_A, 6wmi_A, 2lt7_A, 1tf6_A, 1ubd_C, 7n5w_A, 1tf3_A, 6jnm_A, 1mey_C, 2drp_D, 2gli_A, 7txc_E, 1g2f_F, 6e94_A, 5kl3_A, 7eyi_G, 8h9h_G, 6a57_A, 8cuc_F, 7y3l_A, 1f2i_J, 6blw_A, 4x9j_A, 1llm_D, 2wbs_A
Binding Motifs: UN0275.1 tGATTGTT
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.