Transcription Factor
| Accessions: | P35632 (JASPAR 2024) |
| Names: | AP3_ARATH |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | P35632 |
| Length: | 232 |
| Pfam Domains: | 9-59 SRF-type transcription factor (DNA-binding and dimerisation domain) 71-169 K-box region |
| Sequence: (in bold interface residues) | 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTVLCDARVSIIMFSSSNKLHEYISP 60 61 NTTTKEIVDLYQTISDVDVWATQYERMQETKRKLLETNRNLRTQIKQRLGECLDELDIQE 120 121 LRRLEDEMENTFKLVRERKFKSLGNQIETTKKKNKSQQDIQKNLIHELELRAEDPHYGLV 180 181 DNGGDYDSVLGYQIEGSRAYALRFHQNHHHYYPNHGLHAPSASDIITFHLLE |
| Interface Residues: | 3, 4, 5, 15, 18, 19, 23 |
| 3D-footprint Homologues: | 7x1n_C, 1n6j_A, 1c7u_A, 1mnm_A, 1hbx_A |
| Binding Motifs: | MA0556.1 wwCCaAAArwrGaAA MA0556.2 CCaAAArwrGaAA |
| Binding Sites: | MA0556.1.1 MA0556.1.10 MA0556.1.11 MA0556.1.12 MA0556.1.13 MA0556.1.14 MA0556.1.15 MA0556.1.16 MA0556.1.17 MA0556.1.18 MA0556.1.19 MA0556.1.2 MA0556.1.20 MA0556.1.3 MA0556.1.4 MA0556.1.5 MA0556.1.6 MA0556.1.7 MA0556.1.8 MA0556.1.9 MA0556.2.1 MA0556.2.10 MA0556.2.11 MA0556.2.12 MA0556.2.13 MA0556.2.14 MA0556.2.15 MA0556.2.16 MA0556.2.17 MA0556.2.18 MA0556.2.19 MA0556.2.2 MA0556.2.20 MA0556.2.3 MA0556.2.4 MA0556.2.5 MA0556.2.6 MA0556.2.7 MA0556.2.8 MA0556.2.9 |
| Publications: | Riechmann J. L., Wang M., Meyerowitz E. M. DNA-binding properties of Arabidopsis MADS domain homeotic proteins APETALA1, APETALA3, PISTILLATA and AGAMOUS. Nucleic Acids Res. 24:3134-3141 (1996). [Pubmed] |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.