Transcription Factor
Accessions: | AtMYB41 (AthaMYB 1.0) |
Names: | AtMYB41, Myb domain protein 41, MYB transcription factor, Putative myb family transcription factor, Putative transcription factor MYB41 |
Organisms: | Arabidopsis thaliana |
Libraries: | AthaMYB 1.0 1 1 Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed] |
Uniprot: | Q9M0J5 |
Length: | 283 |
Pfam Domains: | 14-61 Myb-like DNA-binding domain 17-76 Myb-like DNA-binding domain 67-111 Myb-like DNA-binding domain 73-119 Myb-like DNA-binding domain |
Sequence: (in bold interface residues) | 1 MGRSPCCDKNGVKKGPWTAEEDQKLIDYIRFHGPGNWRTLPKNAGLHRCGKSCRLRWTNY 60 61 LRPDIKRGRFSFEEEETIIQLHSVMGNKWSAIAARLPGRTDNEIKNHWNTHIRKRLVRSG 120 121 IDPVTHSPRLDLLDLSSLLSALFNQPNFSAVATHASSLLNPDVLRLASLLLPLQNPNPVY 180 181 PSNLDQNLQTPNTSSESSQPQAETSTVPTNYETSSLEPMNARLDDVGLADVLPPLSESFD 240 241 LDSLMSTPMSSPRQNSIEAETNSSTFFDFGIPEDFILDDFMF* |
Interface Residues: | 14, 49, 50, 51, 52, 54, 55, 58, 59, 60, 101, 102, 105, 106, 109, 110, 111 |
3D-footprint Homologues: | 3osg_A, 1vfc_A, 1w0t_A, 2kdz_A, 7xur_A, 5eyb_B, 6kks_A, 1mse_C, 3zqc_A |
Binding Motifs: | AtMYB41_I wwmaGTTr AtMYB41_II rbTrGTTA |
Binding Sites: | GTTAGTTA AAAAGTTA ACAAGTTA AGGTTA AGTAGTTA AGTGGTTA ATTAGTTG GCTTGTTG GTCAGTTA TACTGTTG TGCGGTTG |
Publications: | Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed] |
Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.