Transcription Factor
| Accessions: | Q9ZU11 (JASPAR 2024) |
| Names: | ATB15_ARATH, HD-ZIP protein ATHB-15, Homeobox-leucine zipper protein ATHB-15, Homeodomain transcription factor ATHB-15, Protein CORONA, Protein INCURVATA 4 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | Q9ZU11 |
| Length: | 836 |
| Pfam Domains: | 17-75 Homeobox domain 161-369 START domain 689-836 MEKHLA domain |
| Sequence: (in bold interface residues) | 1 MAMSCKDGKLGCLDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPK 60 61 QIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVHENSYFRQH 120 121 TPNPSLPAKDTSCESVVTSGQHQLASQNPQRDASPAGLLSIAEETLAEFLSKATGTAVEW 180 181 VQMPGMKPGPDSIGIIAISHGCTGVAARACGLVGLEPTRVAEIVKDRPSWFRECRAVEVM 240 241 NVLPTANGGTVELLYMQLYAPTTLAPPRDFWLLRYTSVLEDGSLVVCERSLKSTQNGPSM 300 301 PLVQNFVRAEMLSSGYLIRPCDGGGSIIHIVDHMDLEACSVPEVLRPLYESPKVLAQKTT 360 361 MAALRQLKQIAQEVTQTNSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWSVIGDS 420 421 MDDVTITVNSSPDKLMGLNLTFANGFAPVSNVVLCAKASMLLQNVPPAILLRFLREHRSE 480 481 WADNNIDAYLAAAVKVGPCSARVGGFGGQVILPLAHTIEHEEFMEVIKLEGLGHSPEDAI 540 541 VPRDIFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSAKEVSSPN 600 601 RTLDLASALEIGSAGTKASTDQSGNSTCARSVMTIAFEFGIESHMQEHVASMARQYVRGI 660 661 ISSVQRVALALSPSHISSQVGLRTPLGTPEAQTLARWICQSYRGYMGVELLKSNSDGNES 720 721 ILKNLWHHTDAIICCSMKALPVFTFANQAGLDMLETTLVALQDISLEKIFDDNGRKTLCS 780 781 EFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEENAHCICFVFINWSFV |
| Interface Residues: | 17, 18, 20, 60, 61, 63, 64, 65, 67, 68, 70, 71, 72, 73, 74, 75, 76, 77, 80, 81 |
| 3D-footprint Homologues: | 2ld5_A, 7psx_B, 7q3o_C, 6a8r_A, 6es3_K, 1nk2_P, 6ryd_F, 5jlw_D, 2xsd_C, 1ig7_A, 1e3o_C, 1le8_A, 1au7_A, 7xrc_C, 1zq3_P, 8g87_X, 5hod_A, 3l1p_A, 1o4x_A, 1du0_A, 5zjt_E, 4qtr_D, 3a01_E, 2h1k_B, 1jgg_B, 3lnq_A, 2lkx_A, 1puf_A, 4xrs_G, 3cmy_A, 2hdd_A, 5vpe_D, 3rkq_B, 2r5y_A, 1puf_B, 1fjl_B, 5flv_I, 3d1n_M, 6wig_A, 1b72_A, 5zfz_A, 4cyc_A, 2hos_A, 6mg1_B, 6m3d_C |
| Binding Motifs: | MA1026.1 tAATdATT MA1026.2 rawwrTAATGATkAy MA1026.3 awwrTAATGATkA |
| Binding Sites: | MA1026.2.3 MA1026.2.15 MA1026.2.18 MA1026.2.19 MA1026.2.6 MA1026.2.5 MA1026.2.7 MA1026.2.8 MA1026.2.9 MA1026.2.14 MA1026.2.11 / MA1026.2.12 MA1026.2.10 MA1026.2.1 MA1026.2.13 MA1026.2.16 MA1026.2.17 MA1026.2.2 MA1026.2.20 MA1026.2.4 MA1026.3.1 MA1026.3.10 MA1026.3.11 / MA1026.3.12 MA1026.3.13 MA1026.3.14 MA1026.3.15 MA1026.3.16 MA1026.3.17 MA1026.3.18 MA1026.3.19 MA1026.3.2 MA1026.3.20 MA1026.3.3 MA1026.3.4 MA1026.3.5 MA1026.3.6 MA1026.3.7 MA1026.3.8 MA1026.3.9 |
| Publications: | Johannesson H., Wang Y., Engstrom P. DNA-binding and dimerization preferences of Arabidopsis homeodomain-leucine zipper transcription factors in vitro. Plant Mol. Biol. 45:63-73 (2001). [Pubmed] |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.