Transcription Factor

Accessions: Q02446 (JASPAR 2024)
Names: SP4_HUMAN, SPR-1, Transcription factor Sp4
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Uniprot: Q02446
Length: 784
Pfam Domains: 647-671 C2H2-type zinc finger
647-671 Zinc finger, C2H2 type
663-690 Zinc-finger double domain
677-701 Zinc finger, C2H2 type
677-701 C2H2-type zinc finger
694-716 Zinc-finger double domain
707-729 Zinc finger, C2H2 type
707-729 C2H2-type zinc finger
Sequence:
(in bold interface residues)
1 MSDQKKEEEEEAAAAAAMATEGGKTSEPENNNKKPKTSGSQDSQPSPLALLAATCSKIGT 60
61 PGENQATGQQQIIIDPSQGLVQLQNQPQQLELVTTQLAGNAWQLVASTPPASKENNVSQP 120
121 ASSSSSSSSSNNGSASPTKTKSGNSSTPGQFQVIQVQNPSGSVQYQVIPQLQTVEGQQIQ 180
181 INPTSSSSLQDLQGQIQLISAGNNQAILTAANRTASGNILAQNLANQTVPVQIRPGVSIP 240
241 LQLQTLPGTQAQVVTTLPINIGGVTLALPVINNVAAGGGTGQVGQPAATADSGTSNGNQL 300
301 VSTPTNTTTSASTMPESPSSSTTCTTTASTSLTSSDTLVSSADTGQYASTSASSSERTIE 360
361 ESQTPAATESEAQSSSQLQPNGMQNAQDQSNSLQQVQIVGQPILQQIQIQQPQQQIIQAI 420
421 PPQSFQLQSGQTIQTIQQQPLQNVQLQAVNPTQVLIRAPTLTPSGQISWQTVQVQNIQSL 480
481 SNLQVQNAGLSQQLTITPVSSSGGTTLAQIAPVAVAGAPITLNTAQLASVPNLQTVSVAN 540
541 LGAAGVQVQGVPVTITSVAGQQQGQDGVKVQQATIAPVTVAVGGIANATIGAVSPDQLTQ 600
601 VHLQQGQQTSDQEVQPGKRLRRVACSCPNCREGEGRGSNEPGKKKQHICHIEGCGKVYGK 660
661 TSHLRAHLRWHTGERPFICNWMFCGKRFTRSDELQRHRRTHTGEKRFECPECSKRFMRSD 720
721 HLSKHVKTHQNKKGGGTALAIVTSGELDSSVTEVLGSPRIVTVAAISQDSNPATPNVSTN 780
781 MEEF
Interface Residues: 634, 636, 637, 638, 639, 643, 659, 660, 661, 662, 663, 665, 666, 668, 669, 672, 689, 690, 691, 692, 693, 695, 696, 697, 700, 717, 718, 719, 720, 721, 722, 723, 724, 725, 728
3D-footprint Homologues: 7eyi_G, 5v3j_F, 2i13_A, 5yel_A, 1tf3_A, 6ml4_A, 7n5w_A, 6jnm_A, 8cuc_F, 2kmk_A, 8ssu_A, 2gli_A, 8gn3_A, 1g2f_F, 6blw_A, 5kkq_D, 1tf6_A, 6u9q_A, 4x9j_A, 1llm_D, 5kl3_A, 1ubd_C, 7ysf_A, 5ei9_F, 8ssq_A, 1mey_C, 5und_A, 5k5i_A, 8h9h_G, 2lt7_A, 7y3m_I, 6e94_A, 6wmi_A, 6a57_A, 2jpa_A, 7w1m_H, 7y3l_A, 3uk3_C, 7txc_E, 2wbs_A, 2drp_D, 1f2i_J, 4m9v_C, 5yj3_D
Binding Motifs: MA0685.1 ywrGCCACGCCCmCtyy
MA0685.2 gGGGMGGrG
Publications: Yokoyama KD, Pollock DD. SP transcription factor paralogs and DNA-binding sites coevolve and adaptively converge in mammals and birds. Genome Biol Evol : (2012;4(11):1102-17.). [Pubmed]
Related annotations: PaperBLAST

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.