Transcription Factor
Accessions: | CG12029 (FlyZincFinger 1.0 ) |
Names: | CG12029 |
Organisms: | Drosophila melanogaster |
Libraries: | FlyZincFinger 1.0 1 1 Enuameh MS et al (2013) Global analysis of Drosophila Cys2-His2 zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants. Genome Res. 23(6):928-40. doi: 10.1101/gr.151472.112 [Pubmed] |
Notes: | family:Cys2His2 zinc finger |
Length: | 117 |
Pfam Domains: | 31-55 C2H2-type zinc finger 32-55 Zinc finger, C2H2 type 47-68 Zinc-finger double domain 61-85 Zinc finger, C2H2 type 61-85 C2H2-type zinc finger 78-101 Zinc-finger double domain 91-113 Zinc finger, C2H2 type 91-113 C2H2-type zinc finger |
Sequence: (in bold interface residues) | 1 GTAAHIASLMSVRTVRYNRRNNPELEKRRIHHCDFVGCSKVYTKSSHLKAHQRIHTGEKP 60 61 YTCQWPECEWRFARSDELTRHYRKHTGAKPFKCIVCERSFARSDHLALHMKRHLPKN |
Interface Residues: | 10, 11, 13, 16, 20, 35, 43, 44, 45, 46, 47, 49, 50, 51, 52, 53, 56, 73, 74, 75, 76, 77, 78, 79, 80, 81, 84, 101, 102, 103, 104, 105, 106, 107, 108, 112 |
3D-footprint Homologues: | 8ssq_A, 7w1m_H, 5kkq_D, 8ssu_A, 6ar1_A, 1tf3_A, 6jnm_A, 5v3j_F, 6ml4_A, 7n5w_A, 3uk3_C, 2kmk_A, 2gli_A, 1g2f_F, 7eyi_G, 1tf6_A, 4x9j_A, 2i13_A, 6blw_A, 5kl3_A, 1ubd_C, 6u9q_A, 5ei9_F, 1mey_C, 5und_A, 7ysf_A, 6wmi_A, 5k5i_A, 4m9v_C, 8h9h_G, 2lt7_A, 7y3m_I, 6e94_A, 6a57_A, 2jpa_A, 8cuc_F, 7y3l_A, 5yel_A, 8gn3_A, 1llm_D, 2wbs_A, 7txc_E, 2drp_D, 1f2i_J, 5yj3_D |
Binding Motifs: | CG12029_SANGER_10_FBgn0035454 gtGGGTGTGGY CG12029_SOLEXA_5_FBgn0035454 krtGGGTGTGGYybk |
Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.