Transcription Factor

						

			
Accessions: AtMYB44 (AthaMYB 1.0)

			
Names: AtMYB44, AtMYBR1, Myb-related protein 44, Myb-related protein R1, Transcription factor MYB44
Organisms: Arabidopsis thaliana
Libraries: AthaMYB 1.0 1
1 Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Uniprot: Q9FDW1
Length: 306
Pfam Domains:      6-51 Myb-like DNA-binding domain
     9-67 Myb-like DNA-binding domain
   60-102 Myb-like DNA-binding domain
   61-107 Myb-like DNA-binding domain
Sequence: 
(in bold interface residues)		   1 MADRIKGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSPQVEHRP   60
  61 FSAEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRKCGGYDHRGYDGSED  120
 121 HRPVKRSVSAGSPPVVTGLYMSPGSPTGSDVSDSSTIPILPSVELFKPVPRPGAVVLPLP  180
 181 IETSSSSDDPPTSLSLSLPGADVSEESNRSHESTNINNTTSSRHNHNNTVSFMPFSGGFR  240
 241 GAIEEMGKSFPGNGGEFMAVVQEMIKAEVRSYMTEMQRNNGGGFVGGFIDNGMIPMSQIG  300
 301 VGRIE*
Interface Residues: 6, 40, 41, 42, 43, 45, 46, 49, 50, 51, 92, 93, 96, 97, 100, 101, 102
3D-footprint Homologues: 1ign_A, 3osg_A, 1vfc_A, 2kdz_A, 7xur_A, 5eyb_B, 6kks_A, 7c4r_A, 1mse_C, 3zqc_A
Binding Motifs: AtMYB44_I wamaGTTr
AtMYB44_II GdtAGTTr
Binding Sites: GTTAGTTA
AAAAGTTA
ACAAGTTA
AGGTTA
AGTAGTTA
GACAGTTG
GTCAGTTA
GTTAGTTG
TACTGTTG
TGCGGTTG
			
Publications: Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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