Transcription Factor

						

			
Accessions: 5d4r_A (3D-footprint 20231221)

			
Names: Arabinose metabolism transcriptional repressor, ARAR_BACSU
Organisms: Bacillus subtilis, strain 168
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Uniprot: P96711
Length: 82
Pfam Domains:     18-81 Bacterial regulatory proteins, gntR family
    45-79 DeoR-like helix-turn-helix domain
    45-76 HTH domain
Sequence: 
(in bold interface residues)		   1 HLEVLFQGPLGSEFMLPKYAQVKEEISSWINQGKILPDQKIPTENELMQQFGVSRHTIRK   60
  61 AIGDLVSQGLLYSVQGGGTFVA
Interface Residues: 19, 43, 44, 45, 48, 54, 55, 56, 57, 58, 59, 60, 75, 76
3D-footprint Homologues: 7zla_B, 6wg7_G, 4p9u_F, 4wwc_B, 4h0e_A, 4u0y_B, 1h9t_B, 6za3_B
Binding Motifs: 5d4r_A ctnnCA
5d4r_AB TGtnCGTaCCa
Binding Sites: 5d4r_T
5d4r_U
			
Publications: Jain D, Narayanan N, Nair DT. Plasticity in Repressor-DNA Interactions Neutralizes Loss of Symmetry in Bipartite Operators. J Biol Chem 291:1235-42 (2016). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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