Transcription Factor

Accessions: LicT (DBTBS 1.0)
Names: LicT, LICT_BACSU
Organisms: Bacillus subtilis
Libraries: DBTBS 1.0 1
1 Sierro N, Makita Y, de Hoon M, Nakai K. DBTBS: a database of transcriptional regulation in Bacillus subtilis containing upstream intergenic conservation information. Nucleic acids research 36:D93-6 (2008). [Pubmed]
Uniprot: P39805
Length: 277
Pfam Domains: 1-59 CAT RNA binding domain
75-163 PRD domain
180-272 PRD domain
Sequence:
(in bold interface residues)
1 MKIAKVINNNVISVVNEQGKELVVMGRGLAFQKKSGDDVDEARIEKVFTLDNKDVSEKFK 60
61 TLLYDIPIECMEVSEEIISYAKLQLGKKLNDSIYVSLTDHINFAIQRNQKGLDIKNALLW 120
121 ETKRLYKDEFAIGKEALVMVKNKTGVSLPEDEAGFIALHIVNAELNEEMPNIINITKVMQ 180
181 EILSIVKYHFKIEFNEESLHYYRFVTHLKFFAQRLFNGTHMESQDDFLLDTVKEKYHRAY 240
241 ECTKKIQTYIEREYEHKLTSDELLYLTIHIERVVKQA
Interface Residues: 27, 124, 213, 226, 265
3D-footprint Homologues: 6fk5_A, 4ncb_B, 6rrd_B, 7jtn_A, 7c0j_A
Binding Motifs: LicT GGATTGTTACTGmkAAAGCAGGCAAAACCTAAA
Binding Sites: bglP_2
bglS_2
Related annotations: PaperBLAST

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