Transcription Factor
| Accessions: | UP00350A (UniPROBE 20160601) |
| Names: | Asg1, Putative 108.8 kDa transcriptional regulatory protein in FKH1-STH1 intergenic region, YIL130W |
| Organisms: | Saccharomyces cerevisiae |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Uniprot: | P40467 |
| Description: | Proposed transcriptional activator, member of the Gal4p family of zinc cluster proteins |
| Length: | 105 |
| Pfam Domains: | 18-54 Fungal Zn(2)-Cys(6) binuclear cluster domain |
| Sequence: (in bold interface residues) | 1 PEQAQQGEQSVKRRRVTRACDECRKKKVKCDGQQPCIHCTVYSYECTYKKPTKRTQNSGN 60 61 SGVLTLGNVTTGPSSSTVVAAAASNPNKLLSNIKTERAILPGAST |
| Interface Residues: | 13, 14, 24, 26, 27, 28, 29, 41, 42, 53, 54, 55 |
| 3D-footprint Homologues: | 1f5e_P, 1pyi_A, 6o19_A, 2er8_C, 1hwt_C, 3coq_A, 6gys_C, 1d66_B, 1zme_D, 7uik_T |
| Binding Motifs: | UP00350A_1 yCCGGsmkagwyCCGG |
| Binding Sites: | ACATCCGG AGTTCCGG ATATCCGG ATCCGGAT CATCCGGC CATCCGGG CCCGGATA CCCGGGTA CCGGAACG CCGGATAA CCGGATAC CCGGGTAA GCCGGATA GTTCCGGA TATCCGGA TCCCGGAA TCCGGAAA TTCCGGAA CCGGATCG TACCCGGA |
| Publications: | *Zhu C, *Byers K, *McCord RP, Shi Z, Berger MF, Newburger D, Saulrieta K, Smith Z, Shah M, Radhakrishnan M, Philippakis AA, Hu Y, De Masi F, Pacek M, Rolfs A , Murthy TVS, LaBaer J, Bulyk ML. High-Resolution DNA Binding Specificity Analysis of Yeast Transcription Factors. Genome Research. Epub January 21, 2009, doi:10.1101/gr.090233.108 (*co-1st authors). [Pubmed] |
| Related annotations: | PaperBLAST |
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