Transcription Factor
| Accessions: | Q38742 (JASPAR 2024) |
| Names: | Q38742_ANTMA |
| Organisms: | Antirrhinum majus |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 248 |
| Pfam Domains: | 9-59 SRF-type transcription factor (DNA-binding and dimerisation domain) 79-174 K-box region |
| Sequence: (in bold interface residues) | 1 MGRGKVQLKRIENKINRQVTFSKRRGGLLKKAHELSVLCDAEVALIVFSNKGKLFEYSTD 60 61 SCMDRILEKYERYSFAERQLVSNEPQSPANWTLEYSKLKARIELLQRNHRHYMGEDLDSM 120 121 SLKEIQSLEQQLDTALKNIRTRKNQLLYDSISELQHKEKAIQEQNTMLAKKIKEKEKEIA 180 181 QQPQWEHHRHHTNASIMPPPPQYSMAPQFPCINVGNTYEGEGANEDRRNELDLTLDSLYS 240 241 CHLGCFAA |
| Interface Residues: | 3, 4, 15, 18, 19, 23 |
| 3D-footprint Homologues: | 1n6j_A, 1c7u_A, 7x1n_C, 1hbx_A, 1mnm_A |
| Binding Motifs: | MA0082.1 mYAwAwAWrGwAAk MA0082.2 mYAwAwAWrGwAA |
| Binding Sites: | MA0082.1.1 MA0082.1.10 MA0082.1.11 MA0082.1.12 MA0082.1.13 MA0082.1.14 MA0082.1.15 MA0082.1.16 MA0082.1.17 MA0082.1.18 MA0082.1.19 MA0082.1.2 MA0082.1.20 MA0082.1.3 MA0082.1.4 MA0082.1.5 MA0082.1.6 MA0082.1.7 MA0082.1.8 MA0082.1.9 MA0082.2.1 MA0082.2.10 MA0082.2.11 MA0082.2.12 MA0082.2.13 MA0082.2.14 MA0082.2.15 MA0082.2.16 MA0082.2.17 MA0082.2.18 MA0082.2.19 MA0082.2.2 MA0082.2.20 MA0082.2.3 MA0082.2.4 MA0082.2.5 MA0082.2.6 MA0082.2.7 MA0082.2.8 MA0082.2.9 |
| Publications: | West A.G, Causier B.E, Davies B, Sharrocks A.D. DNA binding and dimerisation determinants of Antirrhinum majus MADS-box transcription factors. Nucleic acids research 26:5277-87 (1998). [Pubmed] |
| Related annotations: | PaperBLAST |
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