Transcription Factor

						

			
Accessions: AtMYB18 (AthaMYB 1.0)

			
Names: AtMYB18, LAF1, Myb-related protein 18, Protein LONG AFTER FAR-RED LIGHT 1, Transcription factor LAF1
Organisms: Arabidopsis thaliana
Libraries: AthaMYB 1.0 1
1 Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Uniprot: Q9M0K4
Length: 284
Pfam Domains:     12-59 Myb-like DNA-binding domain
    15-74 Myb-like DNA-binding domain
   69-110 Myb-like DNA-binding domain
   69-113 Myb-like DNA-binding domain
Sequence: 
(in bold interface residues)		   1 MAKTKYGERHRKGLWSPEEDEKLRSFILSYGHSCWTTVPIKAGLQRNGKSCRLRWINYLR   60
  61 PGLKRDMISAEEEETILTFHSSLGNKWSQIAKFLPGRTDNEIKNYWHSHLKKKWLKSQSL  120
 121 QDAKSISPPSSSSSSLVACGKRNPETLISNHVFSFQRLLENKSSSPSQESNGNNSHQCSS  180
 181 APEIPRLFFSEWLSSSYPHTDYSSEFTDSKHSQAPNVEETLSAYEEMGDVDQFHYNEMMI  240
 241 NNSNWTLNDIVFGSKCKKQEHHIYREASDCNSSAEFFSPSTTT*
Interface Residues: 12, 47, 48, 49, 50, 52, 53, 56, 57, 58, 99, 100, 103, 104, 107, 108, 109
3D-footprint Homologues: 3osg_A, 2kdz_A, 7xur_A, 3zqc_A, 1mse_C, 5eyb_B, 6kks_A
Binding Motifs: AtMYB18_I awmAGTTr
AtMYB18_II AGwrGTTA
Binding Sites: AAAAGTTA
ACAAGTTA
AGGTTA
AGTAGTTA
AGTGGTTA
ATTAGTTG
GTCAGTTA
TACTGTTG
			
Publications: Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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