Transcription Factor

						

			
Accessions: T003942_1.02 (CISBP 1.02)

			
Names: 0100010458, T003942_1.02;
Organisms: Ostreococcus tauri
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:AP2
Length: 351
Pfam Domains:   146-196 AP2 domain
Sequence: 
(in bold interface residues)		   1 MAHAAFGTSPGSFGASPTFYGSSPTAIPQVSRPMAQPERGLGFPGLSSSLPGKHHIGSPN   60
  61 SGFSAFSPPMNMKDSPRSLASFSSSPPVRSGGVHKPSTSVTKVKRMELARAAVSEATAAA  120
 121 QAVASLPNAAAVSSPPLNSSGKPQKSVYRGVRQRPWGKYAAEIRDPTRGSRLWLGTFDSA  180
 181 EEAALAYDAAARAIRGDAAVTNFGKDVPIPASVRSQLPPLPTRPVQGRGGGIPRDDSALS  240
 241 GRMSKLSTSTKPANLEEEAEMLLMLQGADSGKGSTPERSESIEDGAGGMDLDEDNGASSV  300
 301 TVGLTLRAQKSNAQPIAPMASMPRETGDTSNAMISALKASNVSTRPRRGNA
Interface Residues: 152, 154, 155, 156, 160, 162, 164, 169, 171, 173
3D-footprint Homologues: 5wx9_A, 7wq5_A, 1gcc_A, 7et4_D
Binding Motifs: M0076_1.02 cGCCGCCr
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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