Transcription Factor
| Accessions: | slbo (DrosophilaTF 1.1), Q02637 (JASPAR 2024) |
| Names: | C/EBP, CCAAT/enhancer-binding protein, CEBP_DROME, Slow border cell protein |
| Organisms: | Drosophila melanogaster |
| Libraries: | DrosophilaTF 1.1 1, JASPAR 2024 2 1 Down T.A, Bergman C.M, Su J, Hubbard T.J. Large-scale discovery of promoter motifs in Drosophila melanogaster. PLoS computational biology 3:e7 (2007). [Pubmed] 2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | Q02637 |
| Length: | 449 |
| Pfam Domains: | 363-415 Basic region leucine zipper 366-421 bZIP transcription factor |
| Sequence: (in bold interface residues) | 1 MLNMESPQMYADAVQTLAQLDLKKEPPLQQATIGQITLTAMSTAQQQQQQQQQQQQQQQQ 60 61 QQQQQQQQPQQQTTDANNNTSQDAALLVKQHAMHQMQQVAALGSNNNLLQKQMLQQYSTQ 120 121 TDLDELTTQEITLDLQHLIDDQFRDTETLGIFSDMVTSPGGLSATLPPSGMVSAAAKVLQ 180 181 QQTLRNQHGYGGRGGGGGAGGALAYMPQPVHATYNNSSDENSSVGSDSSTIKEEPIDPEY 240 241 RRHLQEAASQQAAFMGNGAGLYNGYGSGANGLTGGGNPLNGGNTTPSSNGSNGSTGSSNG 300 301 SQFTNLTTANVLAHHNLPHLAAAAGAHNLLKQHSKLHAQQQHQQHQQQQQHRKHSNKHVD 360 361 KGTDEYRRRRERNNIAVRKSREKAKVRSREVEERVKSLLKEKDALIRQLGEMTNELQLHK 420 421 QIYMQLMNHANPEVSRVCRSFLNTNEHSL |
| Interface Residues: | 369, 370, 373, 374, 376, 377, 380, 381 |
| 3D-footprint Homologues: | 7x5e_F, 2wt7_A, 1nwq_C, 6mg1_B, 5t01_B |
| Binding Motifs: | MA0244.1 ATKrCamA slbo TTnnrCAATm |
| Binding Sites: | MA0244.1.1 MA0244.1.10 MA0244.1.11 MA0244.1.12 MA0244.1.2 MA0244.1.3 MA0244.1.4 MA0244.1.5 MA0244.1.6 MA0244.1.7 MA0244.1.8 MA0244.1.9 |
| Publications: | Murphy A. M., Lee T., Andrews C. M., Shilo B. Z., Montell D. J. The breathless FGF receptor homolog, a downstream target of Drosophila C/EBP in the developmental control of cell migration.. Development 121:2255-2263 (1995). [Pubmed] Bergman C.M, Carlson J.W, Celniker S.E. Drosophila DNase I footprint database: a systematic genome annotation of transcription factor binding sites in the fruitfly, Drosophila melanogaster. Bioinformatics (Oxford, England) 21:1747-9 (2005). [Pubmed] |
| Related annotations: | PaperBLAST |
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