Transcription Factor
| Accessions: | P05527 (JASPAR 2024) |
| Names: | HMIN_DROME |
| Organisms: | Drosophila melanogaster |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 576 |
| Pfam Domains: | 472-528 Homeobox domain 529-559 Engrailed homeobox C-terminal signature domain |
| Sequence: (in bold interface residues) | 1 MSTLASTRPPPLKLTIPSLEEAEDHAQERRAGGGGQEVGKMHPDCLPLPLVQPGNSPQVR 60 61 EEEEDEQTECEEQLNIEDEEVEEEHDLDLEDPASCCSENSVLSVGQEQSEAAQAALSAQA 120 121 QARQRLLISQIYRPSAFSSTATTVLPPSEGPPFSPEDLLQLPPSTGTFQEEFLRKSQLYA 180 181 EELMKQQMHLMAAARVNALTAAAAGKQLQMAMAAAAVATVPSGQDALAQLTATALGLGPG 240 241 GAVHPHQQLLLQRDQVHHHHHMQNHLNNNENLHERALKFSIDNILKADFGSRLPKIGALS 300 301 GNIGGGSVSGSSTGSSKNSGNTNGNRSPLKAPKKSGKPLNLAQSNAAANSSLSFSSSLAN 360 361 ICSNSNDSNSTATSSSTTNTSGAPVDLVKSPPPAAGAGATGASGKSGEDSGTPIVWPAWV 420 421 YCTRYSDRPSSGRSPRARKPKKPATSSSAAGGGGGGVEKGEAADGGGVPEDKRPRTAFSG 480 481 TQLARLKHEFNENRYLTEKRRQQLSGELGLNEAQIKIWFQNKRAKLKKSSGTKNPLALQL 540 541 MAQGLYNHSTIPLTREEEELQELQEAASAAAAKEPC |
| Interface Residues: | 472, 473, 474, 475, 476, 513, 514, 516, 517, 520, 521, 524, 525, 528 |
| 3D-footprint Homologues: | 5zfz_A, 1puf_A, 1fjl_B, 6a8r_A, 1ig7_A, 3cmy_A, 2h1k_B, 2lkx_A, 1jgg_B, 3d1n_M, 6m3d_C, 3lnq_A, 1zq3_P, 1nk2_P, 2ld5_A, 7q3o_C, 4cyc_A, 5flv_I, 2hdd_A, 5zjt_E, 2r5y_A, 1au7_A, 5hod_A, 2hos_A, 3a01_E, 7psx_B, 1b72_A, 5jlw_D, 3rkq_B, 6es3_K, 4xrs_G, 1e3o_C, 4j19_B, 1le8_A, 1le8_B, 1du0_A, 6fqp_B, 1mnm_C, 8g87_X, 1puf_B, 1k61_B, 4qtr_D, 1o4x_A |
| Binding Motifs: | MA0229.1 wyTAATTR |
| Binding Sites: | MA0229.1.1 MA0229.1.10 MA0229.1.11 MA0229.1.12 MA0229.1.13 MA0229.1.14 / MA0229.1.19 MA0229.1.15 MA0229.1.16 MA0229.1.17 MA0229.1.18 MA0229.1.2 MA0229.1.20 MA0229.1.3 MA0229.1.4 MA0229.1.5 MA0229.1.6 MA0229.1.7 MA0229.1.8 MA0229.1.9 |
| Publications: | Noyes M.B, Christensen R.G, Wakabayashi A, Stormo G.D, Brodsky M.H, Wolfe S.A. Analysis of homeodomain specificities allows the family-wide prediction of preferred recognition sites. Cell 133:1277-89 (2008). [Pubmed] |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.