Transcription Factor

						

			
Accessions: A8XI59 (JASPAR 2024)

			
Names: A8XI59_CAEBR
Organisms: Caenorhabditis briggsae
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Uniprot: A8XI59
Length: 405
Pfam Domains:   288-321 GATA zinc finger
Sequence: 
(in bold interface residues)		   1 MTSEEQDEVLEEKQKFEKTVKVEPEPKEEIGVESNGSSAVAATAEPAGPCAGCVQLHQEI   60
  61 RQDVKKIMNKIETVCERLEVMLAEKERMNQEQMSESGSEEKYAGSPSGSRESPAFQTNGK  120
 121 MLSAVMGNGGSRKRKPTKESVNRLFENSLIHENGNGSTIEKVPRQVSTPVSASSPFADFN  180
 181 HFNGGLMFDPMPNPQNMMQFLNLVQQQQHHQQAQQAAQIIQKEAQKVKEDVKQKPLEISN  240
 241 SPPNPSPNEQDLLSQLASQFNGKSPSPSVVHAAGSPEDDSSNSGGSRCSNCSTTKTTAWR  300
 301 RDLAGKLVCNACGLYYRLHRTHRPVHMRKDFIQQRFRRKIKEDENPAISQEAVFSQLLGM  360
 361 PPGGAAYSLMEHLNQLSQVQEESAKPSTGRTTESSKPDTGTTTPK
Interface Residues: 297, 298, 300, 310, 314, 315, 318, 335, 337, 338, 366, 386
3D-footprint Homologues: 1gat_A, 3dfx_B, 4gat_A, 3vd6_C, 8dvp_A
Binding Motifs: MA1439.1 sTGATAAs
MA1439.2 TGATAA
			
Publications: Budovskaya Y.V, Wu K, Southworth L.K, Jiang M, Tedesco P, Johnson T.E, Kim S.K. An elt-3/elt-5/elt-6 GATA transcription circuit guides aging in C. elegans. Cell 134:291-303 (2008). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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