Transcription Factor

						

			
Accessions: AtMYB78 (AthaMYB 1.0)

			
Names: At5g49620, AtMYB78, Myb domain protein 78, MYB transcription factor, Myb-related transcription factor
Organisms: Arabidopsis thaliana
Libraries: AthaMYB 1.0 1
1 Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Uniprot: Q9FGY3
Length: 308
Pfam Domains:     28-75 Myb-like DNA-binding domain
    31-88 Myb-like DNA-binding domain
   81-124 Myb-like DNA-binding domain
   85-132 Myb-like DNA-binding domain
Sequence: 
(in bold interface residues)		   1 MGDKGRSLKINKNMEEFTKVEEEMDVRRGPWTVEEDLELINYIASHGEGRWNSLARCAEL   60
  61 KRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHTRWGNRWSKIAQYLPGRTDNEIKN  120
 121 YWRTRVQKHAKQLKCDVNSQQFKDTMKYLWMPRLVERIQAASIGSVSMSSCVTTSSDQFV  180
 181 INNNNTNNVDNLALMSNPNGYITPDNSSVAVSPVSDLTECQVSSEVWKIGQDENLVDPKM  240
 241 TSPNYMDNSSGLLNGDFTKMQDQSDLNWFENINGMVPNYSDSFWNIGNDEDFWLLQQHQQ  300
 301 VHDNGSF*
Interface Residues: 28, 63, 64, 65, 66, 68, 69, 72, 73, 74, 115, 116, 119, 120, 123, 124
3D-footprint Homologues: 3osg_A, 1vfc_A, 2kdz_A, 7xur_A, 6kks_A, 1mse_C, 3zqc_A, 5eyb_B
Binding Motifs: AtMYB78_I wamaGTTr
AtMYB78_II GywdGTTr
Binding Sites: AAAAGTTA
ACAAGTTA
AGGTTA
GCTTGTTG
GTCAGTTA
GTTAGTTG
TACTGTTG
TGCGGTTG
			
Publications: Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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