Transcription Factor
| Accessions: | CEBPE (HT-SELEX2 May2017) |
| Names: | CEBPE, ENSG00000092067 |
| Organisms: | Homo sapiens |
| Libraries: | HT-SELEX2 May2017 1 1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed] |
| Notes: | TF family: bZIP experiment: HT-SELEX Hamming distance: 1 cycle: 4, TF family: bZIP experiment: Methyl-HT-SELEX Hamming distance: 1 cycle: 4 |
| Length: | 143 |
| Pfam Domains: | 66-118 Basic region leucine zipper 67-124 bZIP transcription factor |
| Sequence: (in bold interface residues) | 1 NPLQYQVAHCGQTAMHLPPTLAAPGQPLRVLKAPLATAAPPCSPLLKAPSPAGPLHKGKK 60 61 AVNKDSLEYRLRRERNNIAVRKSRDKAKRRILETQQKVLEYMAENERLRSRVEQLTQELD 120 121 TLRNLFRQIPEAANLIKGVGGCS |
| Interface Residues: | 73, 76, 77, 79, 80, 83, 84 |
| 3D-footprint Homologues: | 1nwq_C, 6mg1_B, 2c9l_Z, 2dgc_A, 5t01_B |
| Binding Motifs: | CEBPE_2 brTTGCGyAAyv CEBPE_methyl_1 yrTTGCGyAAyv |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.