Transcription Factor

						

			
Accessions: CEBPB (SMILE-seq 1.0)

			
Names: CEBPB, CEBPB protein, Fragment, Q9BSC0_HUMAN
Organisms: Homo sapiens
Libraries: SMILE-seq 1.0 1
1 Isakova A, Groux R, Imbeault M, Rainer P, Alpern D, Dainese R, Ambrosini G, Trono D, Bucher P, Deplancke B. SMiLE-seq identifies binding motifs of single and dimeric transcription factors. Nat Methods 14:316-322 (2017). [Pubmed]
Uniprot: Q9BSC0
Notes: TF family: bZIP
Length: 344
Pfam Domains:   270-323 Basic region leucine zipper
  271-329 bZIP transcription factor
Sequence: 
(in bold interface residues)		   1 MQRLVAWDPACLPLPPPPPAFKSMEVANFYYEADCLAAAYGGKAAPAAPPAARPGPRPPA   60
  61 GELGSIGDHERAIDFSPYLEPLGAPQAPAPATATDTFEAAPPAPAPAPASSGQHHDFLSD  120
 121 LFSDDYGGKNCKKPAEYGYVSLGRLGAAKGALHPGCFAPLHPPPPPPPPPAELKAEPGFE  180
 181 PADCKRKEEAGAPGGGAGMAAGFPYALRAYLGYQAVPSGSSGSLSTSSSSSPPGTPSPAD  240
 241 AKAPPTACYAGAAPAPSQVKSKAKKTVDKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQ  300
 301 HKVLELTAENERLQKKVEQLSRELSTLRNLFKQLPEPLLASSGH
Interface Residues: 95, 277, 278, 281, 282, 284, 285, 288, 289, 292, 293
3D-footprint Homologues: 3pih_A, 2wt7_A, 6mg1_B, 1nwq_C, 2wt7_B, 2c9l_Z, 2dgc_A, 5t01_B
Binding Motifs: CEBPB krTTrCGyAAy
			
Publications: Isakova A, Groux R, Imbeault M, Rainer P, Alpern D, Dainese R, Ambrosini G, Trono D, Bucher P, Deplancke B. SMiLE-seq identifies binding motifs of single and dimeric transcription factors. Nat Methods 14:316-322 (2017). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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