Transcription Factor
| Accessions: | vfl (FlyZincFinger 1.0 ) |
| Names: | CG12701 |
| Organisms: | Drosophila melanogaster |
| Libraries: | FlyZincFinger 1.0 1 1 Enuameh MS et al (2013) Global analysis of Drosophila Cys2-His2 zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants. Genome Res. 23(6):928-40. doi: 10.1101/gr.151472.112 [Pubmed] |
| Notes: | family:Cys2His2 zinc finger |
| Length: | 141 |
| Pfam Domains: | 38-61 Zinc-finger double domain 52-74 C2H2-type zinc finger 52-74 Zinc finger, C2H2 type 67-92 Zinc-finger double domain 81-104 C2H2-type zinc finger 81-104 Zinc finger, C2H2 type 95-119 Zinc-finger double domain 110-132 Zinc finger, C2H2 type 111-130 Zinc-finger of C2H2 type 112-133 C2H2-type zinc finger |
| Sequence: (in bold interface residues) | 1 KRRRNSSVGSTSPHSTTLPSGRIKCLECDKEFTKNCYLTQHNKSFHSGEYPFRCQKCGKR 60 61 FQSEDVYTTHLGRHRTQDKPHKCELCPKQFHHKTDLRRHVEAIHTGLKQHMCDICEKGFC 120 121 RKDHLRKHLETHNRPRVVGKK |
| Interface Residues: | 33, 34, 35, 36, 37, 39, 40, 42, 43, 44, 47, 52, 62, 63, 64, 65, 66, 67, 68, 69, 70, 73, 91, 92, 93, 94, 95, 96, 97, 98, 99, 102, 120, 121, 122, 123, 124, 125, 126, 127, 128 |
| 3D-footprint Homologues: | 6jnm_A, 1tf3_A, 5v3j_F, 7n5w_A, 5kkq_D, 1tf6_A, 1ubd_C, 5ei9_F, 8ssq_A, 7w1m_H, 5und_A, 8ssu_A, 6ml4_A, 8h9h_G, 7eyi_G, 2lt7_A, 7y3m_I, 2i13_A, 7ysf_A, 6wmi_A, 6a57_A, 2jpa_A, 2kmk_A, 3uk3_C, 6u9q_A, 5yel_A, 4x9j_A, 1llm_D, 1mey_C, 2drp_D, 2gli_A, 1g2f_F, 6e94_A, 5k5i_A, 6blw_A, 8cuc_F, 7y3l_A, 7txc_E, 5kl3_A, 2wbs_A, 1f2i_J, 8gn3_A, 4m9v_C, 5yj3_D |
| Binding Motifs: | vfl_SANGER_5_FBgn0259789 gCAGGTAG vfl_SOLEXA_5_FBgn0259789 kkkbkCAGGTAGsyg |
| Related annotations: | PaperBLAST |
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