Transcription Factor

						

			
Accessions: AtMYB117 (AthaMYB 1.0)

			
Names: AtMYB117, LOF1, MYB-domain transcription factor LOF1, T24P13.16
Organisms: Arabidopsis thaliana
Libraries: AthaMYB 1.0 1
1 Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Uniprot: Q9LQX5
Length: 281
Pfam Domains:    98-143 Myb-like DNA-binding domain
  101-161 Myb-like DNA-binding domain
  150-194 Myb-like DNA-binding domain
  153-194 Myb-like DNA-binding domain
Sequence: 
(in bold interface residues)		   1 MFITEKQVWMDEIVARRASSSWDFPFNDINIHQHHHRHCNTSHEFEILKSPLGDVAVHEE   60
  61 ESNNNNPNFSNSESGKKETTDSGQSWSSSSSKPSVLGRGHWRPAEDVKLKELVSIYGPQN  120
 121 WNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEEEEERLMQAHRLYGNKWAMIARLFP  180
 181 GRTDNSVKNHWHVVMARKYREHSSAYRRRKLMSNNPLKPHLTNNHHPNPNPNYHSFISTN  240
 241 HYFAQPFPEFNLTHHLVNNAPITSDHNQLVLPFHCFQGSL*
Interface Residues: 83, 84, 87, 88, 132, 133, 134, 135, 137, 138, 142, 143, 150, 184, 185, 188, 189, 192, 193, 194, 209, 211, 219, 221
3D-footprint Homologues: 5eyb_B, 2kdz_A, 7xur_A, 3osg_A, 6kks_A, 3zqc_A, 1mse_C, 7c4r_A, 4noe_A
Binding Motifs: AtMYB117_I wmmwGTTr
AtMYB117_II AGTGGTTA
Binding Sites: AAAAGTTA
ACAAGTTA
AGTGGTTA
TACTGTTG
			
Publications: Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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