Transcription Factor

						

			
Accessions: T023864_1.02 (CISBP 1.02)

			
Names: ABF3, T023864_1.02;
Organisms: Arabidopsis thaliana
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:bZIP
Length: 449
Pfam Domains:   373-418 Basic region leucine zipper
  374-418 bZIP transcription factor
Sequence: 
(in bold interface residues)		   1 MGSRLNFKSFVDGVSEQQPTVGTSLPLTRQNSVFSLTFDEFQNSWGGGIGKDFGSMNMDE   60
  61 LLKNIWTAEESHSMMGNNTSYTNISNGNSGNTVINGGGNNIGGLAVGVGGESGGFFTGGS  120
 121 LQRQGSLTLPRTISQKRVDDVWKELMKEDDIGNGVVNGGTSGIPQRQQTLGEMTLEEFLV  180
 181 RAGVVREEPQPVESVTNFNGGFYGFGSNGGLGTASNGFVANQPQDLSGNGVAVRQDLLTA  240
 241 QTQPLQMQQPQMVQQPQMVQQPQQLIQTQERPFPKQTTIAFSNTVDVVNRSQPATQCQEV  300
 301 KPSILGIHNHPMNNNLLQAVDFKTGVTVAAVSPGSQMSPDLTPKSALDASLSPVPYMFGR  360
 361 VRKTGAVLEKVIERRQKRMIKNRESAARSRARKQAYTMELEAEIAQLKELNEELQKKQVC  420
 421 LASSLSQLRISRFSYFLEVVFTDQMFHAG
Interface Residues: 375, 378, 379, 381, 382, 383, 385, 386, 389, 390
3D-footprint Homologues: 6mg1_B, 1gd2_G, 7x5e_F, 2wt7_A, 5vpe_C, 1dh3_C, 2wt7_B, 4eot_A, 7x5e_E, 2dgc_A, 5t01_B
Binding Motifs: M0267_1.02 ACACGTGT
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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