Transcription Factor

						

			
Accessions: T06474 (AthalianaCistrome v4_May2016)

			
Names: ANAC016, AT1G34180, T06474;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Notes: ecotype:Col-0, experiment type: ampDAP-seq, experiment type: ampDAP-seq (methyl-cytosines removed by PCR), experiment type: DAP-seq, family:NAC
Length: 576
Pfam Domains:    17-155 No apical meristem (NAM) protein
Sequence: 
(in bold interface residues)		   1 MVDSSRDSCFKAGKFSAPGFRFHPTDEELVVYYLKRKICCKKLRVNAIGVVDVYKVDPSE   60
  61 LPGNFQHLLIDFDSCLSMLKTGDRQWFFFTPRNRKYPNAARSSRGTATGYWKATGKDRVI  120
 121 EYNSRSVGLKKTLVFYRGRAPNGERTDWVMHEYTMDEEELGRCKNAKEYYALYKLYKKSG  180
 181 AGPKNGEQYGAPFQEEEWVDSDSEDADSVAVPDYPVVRYENGPCVDDTKFCNPVKLQLED  240
 241 IEKLLNEIPDAPGVNQRQFDEFVGVPQGNSAEVIQSTLLNNSSGEYIDPRTNGMFLPNGQ  300
 301 LYNRDSSFQSHLNSFEATSGMAPLLDNEKEEYIEMNDLLIPELGASSTEKSTEFLNHGEF  360
 361 GDVNEYDQLFNDISVFQGTSTDLSCLSNFTNNTSGQRQQLLYEQFQYQTPENQLNNYMHP  420
 421 STTLNQFTDNMWFKDDQAALYVQPPQSSSGAFTSQSTGVMPESMNPTMSVNPQYKEGQNG  480
 481 GGTRSQFSSALWELLESIPSTPASACEGPLNQTFVRMSSFSRIRFNGTSVTSRKVTVAKK  540
 541 RISNRGFLLLSIMGALCAIFWVFKATVGVMGRPLLS
Interface Residues: 96, 98, 101, 112, 114, 116, 136, 140, 141, 142, 145
3D-footprint Homologues: 7xp3_B, 3swp_A
Binding Motifs: M0631 CkTGsrgmaCAmGba
M0701 CkTGsagmaCAmGbA
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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