Transcription Factor
| Accessions: | Q3URS2 (JASPAR 2024) |
| Names: | ZSC4F_MOUSE |
| Organisms: | Mus musculus |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | Q3URS2 |
| Length: | 506 |
| Pfam Domains: | 52-121 SCAN domain 395-417 C2H2-type zinc finger 395-417 Zinc finger, C2H2 type 440-463 Zinc-finger double domain 452-472 C2H2-type zinc finger 452-474 Zinc finger, C2H2 type 452-471 Zinc-finger of C2H2 type 466-490 Zinc-finger double domain 480-503 C2H2-type zinc finger 480-503 Zinc finger, C2H2 type |
| Sequence: (in bold interface residues) | 1 MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWK 60 61 MFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECL 120 121 KPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPTPDNEQMPVDTTQDRLLATGQ 180 181 ENSENECNNSCNATEANVGESCSGNEMDSLLIMQKEQHPEHEEGNVVCQFPHGARRASQG 240 241 TPSHHVDFPSAPTTADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKS 300 301 DSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSR 360 361 QEQLISDPVLLGKNHEANLPCESHQKRFCRDAKLYKCEECSRMFKHARSLSSHQRTHLNK 420 421 KSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPY 480 481 VCSLCSRRFRQSSTYHRHLRNYHRSD |
| Interface Residues: | 62, 405, 406, 407, 408, 409, 411, 412, 414, 415, 416, 418, 434, 435, 436, 437, 438, 440, 441, 444, 462, 463, 464, 465, 466, 468, 469, 470, 490, 491, 492, 493, 494, 495, 496, 497, 498, 501 |
| 3D-footprint Homologues: | 8g9l_A, 7w1m_H, 5ei9_F, 2drp_D, 8ssq_A, 5v3j_F, 2gli_A, 5kkq_D, 8ssu_A, 7eyi_G, 7ysf_A, 6wmi_A, 2i13_A, 6e94_A, 2jpa_A, 1ubd_C, 3uk3_C, 8cuc_F, 1tf3_A, 7y3l_A, 7n5w_A, 1mey_C, 5und_A, 2kmk_A, 6ml4_A, 1g2f_F, 6blw_A, 1tf6_A, 6u9q_A, 4x9j_A, 5kl3_A, 8h9h_G, 2lt7_A, 6a57_A, 2wbs_A, 5yj3_D, 6jnm_A, 1f2i_J, 5k5i_A, 5yel_A, 8gn3_A, 1llm_D, 4m9v_C, 7y3m_I, 7txc_E |
| Binding Motifs: | PB0026.1 mwdaTGTGCACAymmky PB0130.1 rrmrGCACACACkcmm |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.