Transcription Factor
| Accessions: | JUND (SMILE-seq 1.0) |
| Names: | JUND, JUND_HUMAN |
| Organisms: | Homo sapiens |
| Libraries: | SMILE-seq 1.0 1 1 Isakova A, Groux R, Imbeault M, Rainer P, Alpern D, Dainese R, Ambrosini G, Trono D, Bucher P, Deplancke B. SMiLE-seq identifies binding motifs of single and dimeric transcription factors. Nat Methods 14:316-322 (2017). [Pubmed] |
| Uniprot: | P17535 |
| Notes: | TF family: bZIP |
| Length: | 303 |
| Pfam Domains: | 1-214 Jun-like transcription factor 223-285 bZIP transcription factor 228-283 Basic region leucine zipper |
| Sequence: (in bold interface residues) | 1 MMKKDALTLSLSEQVAAALKPAAAPPPTPLRADGAPSAAPPDGLLASPDLGLLKLASPEL 60 61 ERLIIQSNGLVTTTPTSSQFLYPKVAASEEQEFAEGFVKALEDLHKQNQLGAGAAAAAAA 120 121 AAAGGPSGTATGSAPPGELAPAAAAPEAPVYANLSSYAGGAGGAGGAATVAFAAEPVPFP 180 181 PPPPPGALGPPRLAALKDEPQTVPDVPSFGESPPLSPIDMDTQERIKAERKRLRNRIAAS 240 241 KCRKRKLERISRLEEKVKTLKSQNTELASTASLLREQVAQLKQKVLSHVNSGCQLLPQHQ 300 301 VPA |
| Interface Residues: | 231, 232, 235, 236, 238, 239, 242, 243, 246 |
| 3D-footprint Homologues: | 4eot_A, 7x5e_F, 2wt7_A, 2wt7_B, 1skn_P, 1nwq_C, 1dh3_C, 2dgc_A, 5t01_B, 1gd2_G, 5vpe_C, 5vpe_D |
| Binding Motifs: | JUND_1 krTGmGTCAT JUND_2 aTGACGTmAtc JUND_FOSB_1 taTgActmAtw JUND_FOSL1_1 rrTGActmAt JUND_FOSL1_2 rTGACgymay JUND_FOSL2_1 krTGAsTCAy JUND_FOSL2_2 kkrTkACGTCAycgc JUND_FOS_1 kkrTGAGTCAymv |
| Publications: | Isakova A, Groux R, Imbeault M, Rainer P, Alpern D, Dainese R, Ambrosini G, Trono D, Bucher P, Deplancke B. SMiLE-seq identifies binding motifs of single and dimeric transcription factors. Nat Methods 14:316-322 (2017). [Pubmed] |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.