Transcription Factor

Accessions: P40573 (JASPAR 2024)
Names: MET28_YEAST, Methionine-requiring protein 28, Transcriptional activator of sulfur metabolism MET28
Organisms: Saccharomyces cerevisiae
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 187
Pfam Domains: 105-157 Basic region leucine zipper
108-164 bZIP transcription factor
Sequence:
(in bold interface residues)
1 MSAKQGWEKKSTNIDIASRKGMNVNNLSEHLQNLISSDSELGSRLLSLLLVSSGNAEELI 60
61 SMINNGQDVSQFKKLREPRKGKVAATTAVVVKEEEAPVSTSNELDKIKQERRRKNTEASQ 120
121 RFRIRKKQKNFENMNKLQNLNTQINKLRDRIEQLNKENEFWKAKLNDINEIKSLKLLNDI 180
181 KRRNMGR
Interface Residues: 112, 115, 116, 118, 119, 122, 123
3D-footprint Homologues: 1nwq_C, 6mg1_B
Binding Motifs: MA0332.1 CTGTGG
Publications: MacIsaac K.D, Wang T, Gordon D.B, Gifford D.K, Stormo G.D, Fraenkel E. An improved map of conserved regulatory sites for Saccharomyces cerevisiae. BMC bioinformatics 7:113 (2006). [Pubmed]
Related annotations: PaperBLAST

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