Transcription Factor
| Accessions: | Q5U1D9 (JASPAR 2024) |
| Names: | Q5U1D9_DROME |
| Organisms: | Drosophila melanogaster |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | Q5U1D9 |
| Length: | 837 |
| Pfam Domains: | 396-452 Homeobox domain |
| Sequence: (in bold interface residues) | 1 MQATKMRTPFAIQEILGLGAYQQQATASATPSEAPPSPAATPPPTANTPANGSLSAVQQQ 60 61 QQQQQQQQQQQQQLQQQQQQAIDSLRESRSISPDVSRLSAAAAAAAAAAAHCQLPVFNPA 120 121 NFYAAAGYAAAADPGNAAAAHHHHMTTLAAAAYLRGFLPPGFSTPHEFRGHFQQHFGAQF 180 181 AEQAAARGQEYASSLANASGDEQSPSKNSSSSGNGGSGGSGSGSGGGNPTSNGLGHLGSP 240 241 TASNGGSGGGAGVGGSGGGSGTSGSSSSTSGNGGNGGSSGSRSSPAGPHHSAALAAHQHA 300 301 AAAAAAAHHHAAAAAAAHHAHHAHAQAHAHAHAHVHAHAAHAAHAAHAHAHHAEAFLGAA 360 361 GGAGGNPNSLLAAHGGDVLVGPGGTGPGGKKKNKRRHGRTIFTSSQLEELEKAFKEAHYP 420 421 DVSARELLSMKTGLAEDRIQVWYQNRRAKWRKTEKCWGHSTKMAEYGLYGAMVRHSLPLP 480 481 ETIIKSAKEDESVAPWLLGMHKKSLEAAELLKSDESDRETPTSDDTNTSYSAGSTHNSPI 540 541 SSFSISRLLFDAPPPAAGSAGGKGHHHHHHHHKGHHHAHVHAQAQAHAHMLLHHQQQQQQ 600 601 QQQQQQHHHHLHAAENSLQQQQVAGTGSGSGSGSGSGTGAGSTGPPAHHPYNQQQHLHHL 660 661 QQLQQQQQQQQQQAQQQQQHHHHQHHHSVHHMHHHNAAAGYAEAAVAAAAAAAAVAAAAN 720 721 ARNAAAAAAVAAASASASAAVTIAESEAEEEQDDIEDMELDKDCEVEEDVEPVDNDTNTN 780 781 NEHDNECDADADVEADVDADADADPEIDICDDHDEEMRLQEQLLLKVKQEQAHLGSR |
| Interface Residues: | 394, 395, 396, 397, 398, 399, 437, 438, 440, 441, 444, 445, 448, 449, 452 |
| 3D-footprint Homologues: | 2h1k_B, 4j19_B, 3a01_E, 1puf_A, 6a8r_A, 3cmy_A, 1fjl_B, 3d1n_M, 5zfz_A, 1ig7_A, 2lkx_A, 1nk2_P, 1zq3_P, 6m3d_C, 2ld5_A, 5zjt_E, 2d5v_B, 1jgg_B, 7psx_B, 5hod_A, 3lnq_A, 7q3o_C, 1au7_A, 5jlw_D, 3rkq_B, 6es3_K, 4xrs_G, 2hdd_A, 1b72_A, 4cyc_A, 2r5y_A, 5flv_I, 3l1p_A, 2hos_A, 1e3o_C, 1le8_A, 7xrc_C, 1o4x_A, 8g87_X, 1du0_A, 4qtr_D, 1puf_B |
| Binding Motifs: | MA0181.1 yTAATTR |
| Binding Sites: | MA0181.1.5 MA0181.1.1 MA0181.1.10 MA0181.1.11 MA0181.1.12 MA0181.1.13 MA0181.1.14 MA0181.1.15 MA0181.1.16 MA0181.1.17 MA0181.1.18 MA0181.1.19 MA0181.1.2 MA0181.1.20 MA0181.1.3 MA0181.1.4 MA0181.1.6 MA0181.1.7 MA0181.1.8 MA0181.1.9 |
| Publications: | Noyes M.B, Meng X, Wakabayashi A, Sinha S, Brodsky M.H, Wolfe S.A. A systematic characterization of factors that regulate Drosophila segmentation via a bacterial one-hybrid system. Nucleic acids research 36:2547-60 (2008). [Pubmed] |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.